Arabidopsis thaliana (thale cress): AT5G27120
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Entry
AT5G27120 CDS
T00041
Name
(RefSeq) NOP56-like pre RNA processing ribonucleoprotein
KO
K14565
nucleolar protein 58
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AT5G27120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ath03009
]
AT5G27120
Ribosome biogenesis [BR:
ath03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
AT5G27120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
NOP5NT
Motif
Other DBs
NCBI-GeneID:
832770
NCBI-ProteinID:
NP_198064
TAIR:
AT5G27120
UniProt:
O04658
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All DBs
Position
5:9540861..9544065
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AA seq
533 aa
AA seq
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MLILFETPGGFAIFKVLNEGKLSNVEDLGNEFSTAKLARKMVKLVAFDKFDNTAEALEAV
AKLLEGTPSKGLRKFLKANCVGETLAVADSKLGNIIKEKLKIVCVHNNAVMELLRGIRSQ
LTELISGLGDQDLGPMSLGLSHSLARYKLKFSSDKVDTMIIQAIGLLDDLDKELNTYAMR
VREWFGWHFPELAKIVQDNILYAKAVKLMGNRINAAKLDFSEILADEIEAELKEAAVISM
GTEVSDLDLLHIRELCDQVLSLAEYRAQLYDYLKSRMNTIAPNLTALVGELVGARLISHG
GSLLNLAKQPGSTVQILGAEKALFRALKTKHATPKYGLIFHASVVGQAAPKNKGKISRSL
AAKSVLAIRCDALGDSQDNTMGVENRLKLEARLRTLEGKDLGRLSGSAKGKPKIEVYDKD
KKKGSGGLITPAKTYNTAADSLLQTPTVDSENGVKEKKDKKKKKKADDEEEAKTEEPSKK
KSNKKKTEAEPETAEEPAKKEKKKKRKHEEEETEMPAKKKEKSEKKKKKKTEV
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgctaatactgtttgagacgccaggtggttttgccatcttcaaagtattaaacgaagga
aagctctctaatgttgaggatttgggtaatgagttctcgaccgcaaagttagcccgaaag
atggtgaagctagtagcttttgacaagtttgacaacacagctgaagctcttgaagcagtg
gctaaattgcttgagggaactccaagcaagggtctacgcaagtttttgaaagctaactgt
gttggtgaaacattagctgttgctgattctaagcttggaaatatcatcaaggagaaactg
aaaatagtctgtgttcacaacaatgctgttatggagctgttaagaggtatcagaagccag
ctaactgaacttatatctggattgggtgatcaagatctaggtccaatgagcttggggttg
tctcacagccttgccagatataaactaaagttcagttccgacaaggtggataccatgata
atccaagctattggtctgcttgatgatcttgacaaagagcttaacacttacgctatgagg
gttcgtgaatggtttggttggcattttcctgagcttgctaagatcgtacaggacaatatc
ttatatgccaaggctgttaaactaatggggaatcggattaatgctgcaaagctagacttc
tctgagatattggctgatgaaattgaagcagaactgaaagaggctgctgtgatatctatg
ggaactgaagtcagtgaccttgatttattgcacatccgagaactctgtgaccaggttctt
tctcttgccgagtacagagctcagctttatgactacttgaagagcagaatgaacacaatt
gcaccaaatctaactgcccttgtcggggagctagtcggtgctcgcttaatatctcacggt
ggtagtttgttgaacctcgcaaagcaacctggaagcacggttcagattcttggagctgaa
aaagccttatttagagcccttaagaccaaacacgctactccaaagtatggtttaattttc
catgcatctgttgttggccaagctgcaccgaagaacaagggtaaaatttcacggtcacta
gctgcaaaatctgttcttgctatccgttgtgatgctcttggtgactcccaagacaacact
atgggagttgaaaaccgtttaaagcttgaagcacggttgagaactctcgaaggaaaagat
ttaggacgtctatctggctcagctaaaggcaaaccaaagattgaagtatatgacaaagat
aaaaagaaaggatccggaggtctgatcactcctgctaagacatacaacactgctgcagac
tctcttcttcaaactcccacagtggattcagagaacggtgtgaaagagaagaaagacaaa
aagaagaagaagaaggctgatgatgaggaagaagccaaaactgaggagccctcaaagaag
aaatcgaataagaagaagacagaagcagaacctgaaaccgccgaagagcctgcaaagaag
gagaagaagaagaagagaaaacacgaggaagaggaaactgaaatgcctgctaagaagaag
gaaaagagtgagaagaagaagaagaagaaaactgaggtctga
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