Arabidopsis thaliana (thale cress): AT5G27470
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Entry
AT5G27470 CDS
T00041
Name
(RefSeq) seryl-tRNA synthetase / serine-tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT5G27470
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT5G27470
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G27470
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
AT5G27470
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
AT5G27470
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT5G27470
Prokaryotic type
AT5G27470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Occludin_ELL
HDA2-3
YabA
GDPD
DUF4472
YlqD
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
832806
NCBI-ProteinID:
NP_198099
TAIR:
AT5G27470
UniProt:
Q39230
A0A178UKV3
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:9694938..9697389
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AA seq
451 aa
AA seq
DB search
MLDINLFREEKGNNPEIIRESQRRRFASVEIVDEIIKLDKEWRQRQFEVDSFRKEFNKLN
KQVAQLKIKKEDASEIIQQTEKNKQDSTAKEAEVREAYAALKAKLEQVGNLVHDSVPVDK
DEANNLVIKLWGEKRFSTPGLKLKNHVDLVELLGIADTKRGAEIAGARGFFLKGDGLMLN
QALINFGLTFLKKRGFTGLQPPFFMRKDVMAKCAQLAQFDEELYKVTGEGDDKYLIATAE
QPLCAYHIDEWIHPTELPLRYAGYSSCFRKEAGSHGRDTLGIFRVHQFEKIEQFCITGPN
ENASWEMLDEMMKNSEDFYQALKLPYQIVSIVSGALNDAAAKKYDLEAWFPSSETFRELV
SCSNCTDYQARRLEIRYGQKKSNEQTKQYVHMLNSTLTATERTICCILENYQREDGVDIP
EVLQPFMGGETFLPFKAKPVVADTKGKKSKA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgttggatatcaatctatttcgtgaagagaaaggtaacaatccggagattatccgagaa
tcgcaacgccggagatttgccagcgttgaaatcgtcgatgagatcattaagctggacaag
gaatggcgtcagcgtcaatttgaagttgatagcttcagaaaggagttcaacaagctcaat
aagcaagtggcgcagctcaaaattaaaaaagaagatgcgagtgagattattcaacaaact
gagaaaaacaaacaagattctactgcaaaggaggctgaagttcgtgaagcttatgctgct
ttgaaagccaagttggagcaagttggtaatttggtccatgattctgttccagttgataag
gacgaggctaataatcttgtgattaaactgtggggtgaaaagcggttttctacgcctggt
ctgaagctgaaaaaccatgtggatcttgttgagcttctcggtattgcagataccaaaaga
ggtgctgaaatcgctggagcaagaggctttttcttgaaaggagatggtttgatgcttaac
caagctcttatcaactttgggttaactttcttgaaaaagagaggattcacaggattgcaa
cctccttttttcatgaggaaggatgttatggccaagtgcgcacaattggcacagttcgat
gaagagctttacaaggtgactggtgaaggagatgacaaatacctcattgcaactgctgag
cagcctctttgtgcgtaccatattgatgaatggattcatccgactgagcttcccctaaga
tatgctggttactcatcctgctttagaaaagaagccggttcacatggaagagacaccctt
ggtattttccgtgttcaccagtttgagaaaattgaacagttttgcatcaccggccctaac
gagaatgcctcgtgggaaatgctcgatgagatgatgaagaactctgaagatttttaccaa
gcgctaaaacttccataccaaatcgtctcgatcgtctctggagcattgaatgatgcagct
gcgaaaaagtacgatttggaagcttggtttccttcgtccgagacattcagggagcttgtg
tcttgttccaactgtacagactaccaggctcgcaggcttgagatcagatacggtcagaaa
aagagcaatgagcagacaaagcagtatgtgcatatgctgaattcgacacttactgcaaca
gagaggaccatttgctgcattctcgagaactaccagcgagaggatggtgtcgacattcct
gaggttctgcagccgtttatgggcggagagacgtttttgcctttcaaggccaagcccgta
gttgctgataccaaagggaagaaatcgaaagcttga
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