Arabidopsis thaliana (thale cress): AT5G27620
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Entry
AT5G27620 CDS
T00041
Symbol
CYCH;1
Name
(RefSeq) cyclin H;1
KO
K06634
cyclin H
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03022
Basal transcription factors
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT5G27620 (CYCH;1)
09124 Replication and repair
03420 Nucleotide excision repair
AT5G27620 (CYCH;1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G27620 (CYCH;1)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G27620 (CYCH;1)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AT5G27620 (CYCH;1)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AT5G27620 (CYCH;1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cyclin_C_2
Cyclin_N
TFIIB
RB_B
Guanylin
Motif
Other DBs
NCBI-GeneID:
832824
NCBI-ProteinID:
NP_198114
TAIR:
AT5G27620
UniProt:
Q8W5S1
LinkDB
All DBs
Position
5:9771287..9774920
Genome browser
AA seq
336 aa
AA seq
DB search
MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGS
GDQADKKLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQH
HPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRA
IEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANG
VLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNYKCPSEKDMKHINRKLKSCL
GHSSSHDESKKREKRSKHKSHRSSNDTPNGAPPPIG
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcggattttcagacatcaacacaacgggccaagtggattttcactccccagaaactg
gcagagagatataaagctgctaaccagagggcagtgcaaatgctggagaagtgtggaaca
actcaagttgaagtagatgctagtggatcactaacatatcctaaagataaagttggttca
ggagatcaagctgataagaagcttaagcctttgagtgctgatgaagaaaggttcatgaga
gcattttatgaggcaaaggtccaagaagtgtgcagtgcctttgcatttcctcacaagatt
caggcaacagccctccaatactttaagagattttatctgcaatggtctgttatgcaacat
catccaaaagagataatgttaacctgtgtgtatgcagcttgtaaaatagaggagaatcat
gtatctgctgaggaaattgggaaagggattaaccaagatcaccgaataattctcaagtac
gagatggctgttcttcagagtttggaatttgatctgattgtttatgcaccgtatcgtgca
atcgaaggttttgtcaacaacatggaggaatttcttcaagctagagatgatgaaatccaa
aaactagagagtttgctcaaaggggcgacagcagaagccgataaagttatgctcacagat
gctccactcctctttcctcctggccagttggcattggcgtcgttacgtattgcaaatggg
gttcttggagtgattgactttgataggtacctagagaacattgtttctcaaccgaactct
gagcacacgacttcagagcttacaaagttacttgataacatcgaatatttggtaaagaac
tacaagtgcccaagtgaaaaggacatgaagcatatcaaccggaagctaaaatcttgtcta
ggacatagttcttcacatgacgagagtaagaaacgggagaagagatcaaaacacaagtcc
cataggagctccaatgatacaccaaacggggcaccgccacccataggttga
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integrated database retrieval system