KEGG   Arabidopsis thaliana (thale cress): AT5G27620
Entry
AT5G27620         CDS       T00041                                 
Symbol
CYCH;1
Name
(RefSeq) cyclin H;1
  KO
K06634  cyclin H
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03022  Basal transcription factors
ath03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    AT5G27620 (CYCH;1)
  09124 Replication and repair
   03420 Nucleotide excision repair
    AT5G27620 (CYCH;1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT5G27620 (CYCH;1)
   03400 DNA repair and recombination proteins [BR:ath03400]
    AT5G27620 (CYCH;1)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     AT5G27620 (CYCH;1)
DNA repair and recombination proteins [BR:ath03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     AT5G27620 (CYCH;1)
SSDB
Motif
Pfam: Cyclin_C_2 Cyclin_N TFIIB RB_B Guanylin
Other DBs
NCBI-GeneID: 832824
NCBI-ProteinID: NP_198114
TAIR: AT5G27620
UniProt: Q8W5S1
LinkDB
Position
5:9771287..9774920
AA seq 336 aa
MADFQTSTQRAKWIFTPQKLAERYKAANQRAVQMLEKCGTTQVEVDASGSLTYPKDKVGS
GDQADKKLKPLSADEERFMRAFYEAKVQEVCSAFAFPHKIQATALQYFKRFYLQWSVMQH
HPKEIMLTCVYAACKIEENHVSAEEIGKGINQDHRIILKYEMAVLQSLEFDLIVYAPYRA
IEGFVNNMEEFLQARDDEIQKLESLLKGATAEADKVMLTDAPLLFPPGQLALASLRIANG
VLGVIDFDRYLENIVSQPNSEHTTSELTKLLDNIEYLVKNYKCPSEKDMKHINRKLKSCL
GHSSSHDESKKREKRSKHKSHRSSNDTPNGAPPPIG
NT seq 1011 nt   +upstreamnt  +downstreamnt
atggcggattttcagacatcaacacaacgggccaagtggattttcactccccagaaactg
gcagagagatataaagctgctaaccagagggcagtgcaaatgctggagaagtgtggaaca
actcaagttgaagtagatgctagtggatcactaacatatcctaaagataaagttggttca
ggagatcaagctgataagaagcttaagcctttgagtgctgatgaagaaaggttcatgaga
gcattttatgaggcaaaggtccaagaagtgtgcagtgcctttgcatttcctcacaagatt
caggcaacagccctccaatactttaagagattttatctgcaatggtctgttatgcaacat
catccaaaagagataatgttaacctgtgtgtatgcagcttgtaaaatagaggagaatcat
gtatctgctgaggaaattgggaaagggattaaccaagatcaccgaataattctcaagtac
gagatggctgttcttcagagtttggaatttgatctgattgtttatgcaccgtatcgtgca
atcgaaggttttgtcaacaacatggaggaatttcttcaagctagagatgatgaaatccaa
aaactagagagtttgctcaaaggggcgacagcagaagccgataaagttatgctcacagat
gctccactcctctttcctcctggccagttggcattggcgtcgttacgtattgcaaatggg
gttcttggagtgattgactttgataggtacctagagaacattgtttctcaaccgaactct
gagcacacgacttcagagcttacaaagttacttgataacatcgaatatttggtaaagaac
tacaagtgcccaagtgaaaaggacatgaagcatatcaaccggaagctaaaatcttgtcta
ggacatagttcttcacatgacgagagtaagaaacgggagaagagatcaaaacacaagtcc
cataggagctccaatgatacaccaaacggggcaccgccacccataggttga

DBGET integrated database retrieval system