Arabidopsis thaliana (thale cress): AT5G27640
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Entry
AT5G27640 CDS
T00041
Symbol
TIF3B1
Name
(RefSeq) translation initiation factor 3B1
KO
K03253
translation initiation factor 3 subunit B
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G27640 (TIF3B1)
03012 Translation factors [BR:
ath03012
]
AT5G27640 (TIF3B1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AT5G27640 (TIF3B1)
Translation factors [BR:
ath03012
]
Eukaryotic type
Initiation factors
eIF-3
AT5G27640 (TIF3B1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF2A
RRM_1
ANAPC4_WD40
IKI3
Motif
Other DBs
NCBI-GeneID:
832826
NCBI-ProteinID:
NP_001330567
TAIR:
AT5G27640
UniProt:
Q9C5Z1
A0A178UHP9
LinkDB
All DBs
Position
5:complement(9780609..9785288)
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AA seq
712 aa
AA seq
DB search
MEVVDIDARAAKLGIDWSQVNFDSIQLPPGEDFGIESDDEAVYQDDQSEFDTGFGNIIVV
DHLPVVPKEKFEKLEGVVKKIYNQLGVIKENGLWMPVDPDTKMTLGYCFIEFNTPQEAQN
AKEKSHGYKLDKSHIFAVNMFDDFDRLMNVKEEWEPPQARPYVPGENLQKWLTDEKARDQ
LVIRSGPDTEVFWNDTRQKAPEPVHKRPYWTESYVQWSPLGTYLVTLHKQGAAVWGGADT
FTRLMRYQHSMVKLVDFSPGEKYLVTYHSQEPSNPRDASKVEIKVFDVRTGRMMRDFKGS
ADEFSIGGPGGVAGASWPVFRWAGGKDDKYFAKLSKNTISVYETETFSLIDKKSMKVDNV
VDICWSPTDSILSLFVPEQGGGNQPAKVALVQIPSKVELRQKNLFSVSDCKMYWQSSGEY
LAVKVDRYTKTKKSTYSGFELFRIKERDIPIEVLELDNKNDKIIAFAWEPKGHRFAVIHG
DQPRPDVSFYSMKTAQNTGRVSKLATLKAKQANALFWSPTGKYIILAGLKGFNGQLEFFN
VDELETMATAEHFMATDIEWDPTGRYVATAVTSVHEMENGFTIWSFNGIMLYRILKDHFF
QLAWRPRPPSFLTAEKEEEIAKTLKKYSKKYEAEDQDVSLLLSEQDREKRKALKEEWEKW
VMQWKSLHEEEKLVRQNLRDGEVSDVEEDEYEAKEVEFEDLIDVTEEIVQES
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggaggtcgttgatattgatgcccgagctgctaagttagggattgattggtctcaggtt
aattttgattccatccaacttcctcctggagaagactttgggatcgagagtgatgatgaa
gctgtttaccaggatgaccagtctgaattcgacactggattcggtaacattatcgtggtc
gatcacctccctgttgttcccaaggagaagtttgagaaacttgaaggtgttgtcaagaaa
atttacaaccagttaggtgtgattaaggaaaatggactgtggatgcctgttgatcccgat
accaagatgacattgggctactgttttattgagttcaacactcctcaggaagcacaaaac
gctaaggaaaagtctcatggctacaagttggacaagtctcacatctttgctgtaaacatg
ttcgatgattttgacaggttgatgaatgtgaaggaggagtgggagcctcctcaggccagg
ccctacgtccctggggaaaatttgcaaaaatggcttactgatgaaaaagcccgagaccag
ctagtcattcgttctggccctgatactgaagttttctggaatgatactaggcagaaggcg
cctgaacctgttcataagcgtccttattggacagagagttatgtgcagtggtctccttta
ggtacataccttgtgacactccacaagcagggggcagctgtttggggtggtgctgataca
ttcacgcgtctcatgcgttatcagcattctatggtaaaactagttgatttctcgccaggt
gagaaatatcttgtaacttaccatagccaagaaccaagcaacccgcgagatgcaagtaaa
gttgagattaaggtttttgatgtgagaaccgggaggatgatgagagatttcaagggtagt
gctgatgagttttcaattggaggacctggtggtgttgctggtgcctcttggcctgttttc
agatgggctggtggaaaagatgataaatactttgccaagcttagcaaaaacactatctct
gtctatgagactgagactttcagcctaatagacaagaaatccatgaaggtagataatgtt
gtggatatctgctggtctcctactgattccatcctttcattgtttgttcctgaacaaggt
ggtggaaaccaacctgcgaaggttgccctagtccaaatcccgagcaaggtggagctgagg
cagaagaatctcttcagtgtgagcgactgcaagatgtactggcagagtagtggagagtat
cttgctgtcaaggttgatcgatacacaaaaactaagaagagcacatactctggatttgaa
cttttccgtatcaaagaaagggatattcccatcgaggttcttgagctggacaacaagaac
gacaagatcattgcttttgcatgggagcccaagggtcacaggtttgctgtgattcatggt
gaccaaccaagaccagatgtcagtttctactcaatgaagaccgcacaaaacactggaagg
gtttcaaagctcgcaactttgaaggccaaacaagctaatgccctcttctggtcgcccaca
ggcaagtacataattcttgctgggttaaaaggtttcaatggccagcttgaatttttcaac
gtggatgagctcgagacaatggccacagctgaacacttcatggccacggatatcgaatgg
gacccgactggaaggtacgttgcaaccgcagtgacatcagtccatgagatggagaatggg
ttcaccatatggtctttcaacgggattatgctttaccggatattgaaggatcatttcttc
cagttggcttggcgtccaagacctccatcattcttgactgcagagaaggaagaagagata
gcaaagaccctgaagaagtacagcaagaagtatgaggcagaggatcaggacgtgtcgttg
ctgttgagtgaacaagacagagagaagagaaaggcattgaaggaagaatgggagaaatgg
gtaatgcagtggaagtctctgcatgaagaggagaaactcgtgaggcaaaaccttcgggat
ggtgaagtaagtgatgtggaagaagatgaatatgaagccaaagaagttgagtttgaggat
cttatcgatgtcactgaggaaatcgttcaagagtcgtaa
DBGET
integrated database retrieval system
