Arabidopsis thaliana (thale cress): AT5G27840
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Entry
AT5G27840 CDS
T00041
Symbol
TOPP8
Name
(RefSeq) Calcineurin-like metallo-phosphoesterase superfamily protein
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
ath04156
Integrated stress response (ISR) signaling pathway
ath04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT5G27840 (TOPP8)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
AT5G27840 (TOPP8)
09140 Cellular Processes
09143 Cell growth and death
04156 Integrated stress response (ISR) signaling pathway
AT5G27840 (TOPP8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT5G27840 (TOPP8)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G27840 (TOPP8)
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G27840 (TOPP8)
03041 Spliceosome [BR:
ath03041
]
AT5G27840 (TOPP8)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
AT5G27840 (TOPP8)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
AT5G27840 (TOPP8)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AT5G27840 (TOPP8)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
AT5G27840 (TOPP8)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT5G27840 (TOPP8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
832846
NCBI-ProteinID:
NP_001330890
TAIR:
AT5G27840
UniProt:
O82734
LinkDB
All DBs
Position
5:complement(9862923..9865172)
Genome browser
AA seq
324 aa
AA seq
DB search
MMTSMEGMVEKGVLDDIIRRLLEGKGGKQVQLSESEIRQLCFNARQIFLSQPNLLDLHAP
IRICGDIHGQYQDLLRLFEYGGYPPSANYLFLGDYVDRGKQSLETICLLLAYKIRYPSKI
YLLRGNHEDAKINRIYGFYDECKRRFNVRLWKVFTDCFNCLPVAALIDEKILCMHGGLSP
DLDNLNQIREIQRPIEIPDSGLLCDLLWSDPDQKIEGWADSDRGISCTFGADKVAEFLDK
NDLDLICRGHQVVEDGYEFFAKRRLVTIFSAPNYGGEFDNAGALLSVDESLVCSFEIMKP
APASSSHPLKKDFHNRTLGYNLSA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgagtatggaagggatggtggagaaaggagtattggatgatattataagaaga
ttgttagaaggtaaaggaggcaaacaggttcagctttccgagagcgagattcgtcaactc
tgctttaacgctcgtcaaatcttcctctctcaacctaatctccttgatctccatgcccca
attcgcatctgcggtgatattcatggtcaatatcaagatcttttgaggttgtttgaatac
ggaggttatcctccttcagcaaactatctattccttggtgattacgttgacagaggcaaa
caaagtcttgagaccatatgtttgcttcttgcttacaagatacggtacccatcgaagata
tatctgttgagagggaaccatgaggatgctaagatcaacaggatttacgggttttatgac
gagtgcaaacggagattcaatgtacgactctggaaggtgtttactgattgcttcaactgt
ttacctgtagctgcacttattgatgagaagatactgtgtatgcacggtggtttgtcacca
gatttggataatttgaatcagattcgagagattcaaaggcctattgagattccagacagt
ggtcttctttgtgatttactttggtcagatcctgatcagaagattgaaggttgggctgat
agtgatcgaggtatctcttgcacttttggagctgataaagtcgctgagttcttggataag
aatgatcttgacctcatttgccgaggccatcaggtagtagaagacgggtatgagtttttc
gcaaaacggagattagtcacgatattctcagctccaaactatggtggggagtttgacaac
gctggtgcgttattaagcgttgacgagtctcttgtatgttcctttgagattatgaaacca
gccccagcttcaagcagtcatcctctcaagaaggactttcacaacagaaccttaggttat
aatttgagtgcttag
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integrated database retrieval system
