Arabidopsis thaliana (thale cress): AT5G27945
Help
Entry
AT5G27945 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G27945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G27945
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G27945
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
AT5G27945
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
AT5G27945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR19_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
EIF3I
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
Beta-prop_HPS5
eIF2A
Beta-prop_EIPR1
Beta-prop_SCAP
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Ge1_WD40
WDR54
CFAP43_N
Beta-prop_RIG_1st
YajC
Motif
Other DBs
NCBI-GeneID:
832862
NCBI-ProteinID:
NP_568505
TAIR:
AT5G27945
UniProt:
F4K5R6
LinkDB
All DBs
Position
5:9976007..9977601
Genome browser
AA seq
428 aa
AA seq
DB search
MMKSIALALCLTHHSPMVLSIVDYGDSQEKTIDSLWKKPHGSDLTWSGFSRVGVTEAYFA
VPVDHFLTNPPSLRLSQTIYCRRGSSYVETEKVEEEDRDDFLKQVWFLTDNLVFFFVDIE
EYIVIEQLGDTVYLWDASSCYTSKLVTIDDENGPVTSINWTQDGLDLAVGLDNSEVQVWD
CVSNRHVRTLRGGHESRVGSLAWNNHILTTGGMDGKIVNNDVRIRSSIIGTYVGHTEEVC
GLKWSESGKKLASGGNDNVVHIWDRSLASSNPTRQWLHRFEEHTAAVRALAWCPFQASLL
ATGGGVGDGKINFWNTHTGACLNSVETGSQVCSLLWSKSERELLSAHGFTQNQLTLWKYP
SMVKMAELNGHTSRVLFMAQSPDGCTVASAAGDETLRLWNVFGEPPKTTKKAASKKYTEP
FAHVNHIR
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagtcgatagctcttgctctgtgtttgacacaccattctccaatggttctgtcc
attgttgattatggtgattctcaggagaagacaatagattcgttgtggaagaaaccgcac
ggctctgacctaacttggtctggtttttctcgggttggagtaacagaagcttattttgca
gtacccgtagaccactttctaacgaatcctccatctctaagactttctcagacaatttat
tgtcgtcgaggatcttcttacgtagaaacagagaaagtggaagaagaagacagagacgat
ttcttgaagcaagtttggtttctcacagacaatttggttttcttcttcgtcgacattgaa
gaatacattgtgattgaacagttgggagacactgtttacttgtgggatgcgtctagttgt
tatacatctaagcttgtgaccattgatgatgagaatggacctgtcacaagtattaactgg
acgcaagatggtcttgatctggcagttggtcttgacaacagtgaagtccaggtttgggat
tgtgtttccaatcgtcatgtgagaacattgagaggtggtcacgagtcaagagtaggatca
ttggcatggaacaatcacattctaacaactggaggaatggatggaaagatcgtcaacaat
gatgtgaggatcagatcatccattattggaacttacgtgggtcacactgaagaggtttgt
ggtcttaagtggtcagaatctggaaaaaaactagcaagtggtggtaacgacaatgtagta
cacatatgggatcgttctctcgcttcctcaaacccaactaggcaatggctgcataggttt
gaggaacatactgctgcagtgagagctcttgcgtggtgccctttccaagcaagtttgctt
gcaactggtggtggtgttggagatgggaagattaacttctggaatacacacactggggct
tgcttgaattcagtagaaactggctctcaagtatgttcattgttatggagcaaaagtgaa
agagagttgcttagcgcacatgggtttacgcagaaccagcttacactttggaagtaccca
tctatggtgaaaatggctgaactcaatggtcatacatcaagagttctttttatggcacag
agtccggatggttgtaccgtggcttcagcagcaggtgacgagactctcaggctttggaat
gtttttggagaaccacctaagaccaccaagaaagctgcttcaaaaaaatatacggagcca
tttgctcatgtgaatcatattaggtga
DBGET
integrated database retrieval system
