Arabidopsis thaliana (thale cress): AT5G28210
Help
Entry
AT5G28210 CDS
T00041
Name
(RefSeq) mRNA capping enzyme family protein
KO
K13917
mRNA-capping enzyme [EC:
2.7.7.50
3.6.1.74
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT5G28210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G28210
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.50 mRNA guanylyltransferase
AT5G28210
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.74 mRNA 5'-phosphatase
AT5G28210
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
AT5G28210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mRNA_cap_enzyme
mRNA_cap_C
DSPc
DNA_ligase_A_M
Tc-R-P
PTP-NADK
PTP-SAK
Y_phosphatase2
Y_phosphatase
Y_phosphatase3
Motif
Other DBs
NCBI-GeneID:
832897
NCBI-ProteinID:
NP_198173
TAIR:
AT5G28210
UniProt:
Q9S9L3
LinkDB
All DBs
Position
5:10188586..10190463
Genome browser
AA seq
625 aa
AA seq
DB search
MISTMYSEETSERSSFPSKRHLEDRTENREEHSKRLRPTSFRDQKVTIPQGWLDCPRFGQ
HIGLIIPSKVPLSESYNDCVPSGKRYNFKQWLTKIGLVIDLTNTTRYYHPNTELRQNRIE
YVKIRCSGRDSVPDNVSVNTFVHEVTQFENHNLSEKYLLVHCTHGHNRTGFMIVHYLMRS
RPMMSVTQALKIFSDARPPGIYKPDYIDALYRFYHEVKPGSVICPPTPEWKRSEEAKFDD
DDNALSYREVQGNNQEENVQLSNDDVLGDEIPYDQEVSYQNSINHMLNISMQFPGSHPLS
LGREALQLLRQRYYYATWKADGTRYMMLLTRDGCYLVNREYRFRRVQMRFPCEYEPSDYK
VHHYTLLDGEMVVDTIKEGETQRHVRRYLVYDLVAINGQFVAERPFSERWNILERELIKP
RNDEKKVRDHWYRYDKEPFGVRIKAFCLLSAVEKKVFNELIPLLSHESDGLIFQGWDNPY
VFGPNKDLLKWKFVETLDFLFDMDKYGRQMLFLQERGRMKLMEGFAVEFRGDGWDNDLAS
YCGKIVECSWDKEKKVWVSLRIRVDKSKPNGIGTGRSVIKCIEDDLTKEVLLKEIKEIIL
LPMYVERIENDTKEAARRKHGNRKG
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatttctacgatgtactcagaagaaacatcggaaagatcttcttttccctctaaacga
catctcgaagaccgaactgagaaccgtgaagaacatagcaaaagattgagaccaacaagt
ttccgtgatcagaaggtaaccatccctcaaggttggttagattgtcctcgctttggtcaa
catattggattaatcattccttcgaaagttcctctcagtgaatcttacaacgattgtgtt
ccttctggcaaaagatacaatttcaaacagtggttaactaagattggtcttgtgattgat
ctgactaatacaactcgttactatcatcctaacaccgagttaagacagaaccgtatcgag
tatgttaagattcgttgcagtggtcgtgattctgtgccggataatgtgtctgtaaacaca
tttgttcacgaggttactcagttcgagaatcataacttgtcggagaagtatcttcttgtg
cattgtactcacggacataatcgtacagggtttatgattgttcattaccttatgcggtct
agaccgatgatgagtgttacacaagccttgaaaatattttcggatgctcgcccgccgggt
atctataaacccgattacattgatgctctatacagattttatcatgaggttaaacctggg
agtgttatatgtccaccaactcctgaatggaagaggtctgaagaagctaaattcgacgat
gatgataatgctctgtcttaccgtgaggtacaaggaaacaatcaggaggagaatgtgcag
ttgtctaatgatgatgttttgggggatgaaataccctatgatcaagaggtgtcttaccag
aattcaattaatcatatgctgaatatttctatgcagttccctggctcgcaccctctatca
ttaggtagagaggcattgcaactcttgaggcaacggtactattacgcgacatggaaggca
gatggaacgcggtacatgatgctcttgactagagatggatgttatctggttaatagagag
tataggtttagaagagtacaaatgcgtttcccttgtgagtacgagccaagtgattataaa
gtgcatcattacacattgcttgatggagagatggttgtagacacaattaaggaaggagaa
acgcagcgccatgtgaggaggtacctcgtgtacgatttggtagcgatcaacgggcaattt
gtggcagagaggccttttagtgaaagatggaatattcttgagagagagctgatcaaaccg
cgtaatgacgagaagaaggttagggatcattggtatagatatgataaggagccttttggt
gtacggatcaaagctttttgtttactctctgctgtggagaagaaggttttcaatgagttg
attccactgctttcacatgaatcagacggactaatatttcaaggttgggacaatccttat
gttttcggacccaacaaagatctactgaagtggaagtttgtggaaacacttgattttctg
tttgatatggacaagtatggacgtcaaatgctcttcttgcaagaacgtgggaggatgaag
cttatggaaggctttgccgttgagtttagaggtgatggttgggacaatgacctggctagt
tactgtggaaagattgtggagtgttcatgggataaggagaagaaagtatgggttagtttg
cggattagagttgataaatcgaaaccgaatggtatcgggaccggtcgtagcgtgataaag
tgcatagaagatgacttaacgaaagaggttttgctgaaggagatcaaagagattatcctt
ctaccgatgtacgttgagcgcatcgaaaatgatacaaaagaagctgcacgtcgcaagcat
ggaaaccgtaaaggctaa
DBGET
integrated database retrieval system
