Arabidopsis thaliana (thale cress): AT5G28237
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Entry
AT5G28237 CDS
T00041
Name
(RefSeq) Pyridoxal-5'-phosphate-dependent enzyme family protein
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01230
Biosynthesis of amino acids
Module
ath_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT5G28237
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
AT5G28237
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
AT5G28237
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
DAO
Macro_2
Motif
Other DBs
NCBI-GeneID:
2746023
NCBI-ProteinID:
NP_001330719
TAIR:
AT5G28237
UniProt:
A0A1P8BBQ3
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All DBs
Position
5:complement(10207287..10213598)
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AA seq
437 aa
AA seq
DB search
MSSSKIQVRGQPLLRVPARNHRMTHLVVCGVSTKRHHREINALSSNSGPSLDSVPTRTDK
RQFLRGDGNGKFGRFGGKFVPETLMSRLIELEDEFNFVRCDHEFQEELTTALRDYVGRET
PLYFAERLTEHYKNIVPTIEGGPEIYLKREDLSHCGSHKINNALAQAMISRRLGCSRVVA
ATGAGQHGVATAAACAKLSLECTVFMGAADIEKQSFNVLSMKLLGAQVISVEGTFKDASS
EAIRNWVENLYTTYYLSGTVVGPHPCPIIVREFQSVIGKETRRQAKQLWGGKPDVLVACV
GSGSNALGLFHEFVGDEDVRLVGVEAAGLGLDSGKHSATLAFGDVGVYHGSMSYLLQDDQ
GQILKPHSVGVGLEYPGVGPEISFMKETGRAEFYTATDEEAIQGTYLIVRHEQNLIITGP
FLNSNWTVTVTINRKID
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccagtaaaatccaggtacgagggcagccacttcttagggttccggcaagaaac
caccgtatgacacacttggttgtttgcggcgtttccacaaaacgccaccaccgtgaaatc
aatgcactcagcagtaatagtggtccatcgttggattcggtcccaacaagaaccgacaag
aggcagtttcttcgtggtgacggtaacggtaaattcgggaggttcggtgggaagtttgta
ccggagacattgatgtctcgcctgatagaacttgaagacgaatttaactttgttaggtgc
gatcacgaatttcaggaggagcttaccacagcgttaagagactacgtaggaagagaaacg
cctctctacttcgccgaacgtctaaccgaacactacaagaacatagttccaaccatcgaa
ggtggaccagagatatacttgaaacgggaagatcttagccactgtgggtctcacaaaatc
aataatgctctcgctcaggccatgatttcccggcggcttggttgcagccgtgtggtggcg
gccactggagccggacaacatggagtcgccacagcggctgcatgtgcaaagctctccttg
gagtgtactgttttcatgggagctgctgatatagagaaacaatcctttaatgtactttcc
atgaaactccttggtgctcaggttatatcagtggaaggaacattcaaagatgcaagttca
gaagctatacgaaactgggtcgaaaacctatataccacatactacttatcgggtacggtc
gtaggaccgcatccgtgtccgataatagtacgtgagtttcaatctgtgatcgggaaagag
acaagaaggcaagccaagcaactatggggtggtaagcctgatgtgttggtggcctgtgtg
ggaagtggctcaaacgcattgggtttgttccatgagtttgttggggatgaggatgtgcgg
ttagtcggtgtcgaggctgcggggcttggtctggattcggggaaacattcagctactttg
gcctttggagatgttggtgtataccatggttccatgagctatttattgcaagatgatcaa
ggacagatacttaaaccacactccgtaggtgttgggttagagtatcccggagttggaccg
gagattagtttcatgaaagaaactggcagagcggagttctatacagcaacagacgaagaa
gcaattcaaggtacgtacctcatagttaggcatgagcaaaatttaatcataaccggaccg
tttttaaacagtaattggactgtaaccgtaaccattaaccgtaaaatagattaa
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