Arabidopsis thaliana (thale cress): AT5G37870
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Entry
AT5G37870 CDS
T00041
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G37870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G37870
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G37870
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT5G37870
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_3
zf-C3HC4_2
DUF1644
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
833765
NCBI-ProteinID:
NP_198603
TAIR:
AT5G37870
UniProt:
Q9FKD9
A0A178UH98
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All DBs
Position
5:complement(15073764..15074851)
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AA seq
281 aa
AA seq
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MVGVLLSERNGSQKRHCSSISSDDGRKRVDKTRSAMLTDLDILDCPICYQALKIPVFQCG
NGHLACSSCCPKLRNKCPACALPVGHIRCRAMERVLESVLVPCRYADLGCTKTIYYGRES
THEKICNFSPCSCPVQGCNYTGSYKDLYEHYDLTHSTGSTAYSFNGVSYIAAMMFISDKI
LIERVYEKKLLFVVQCFEEPCGVYVSVSCIAPSAPEVGEFSYGLLYTTWEGVTMTYQSPK
VKKVLKVSSQRPKDSFMLIPHSLLCGPLLGMMLCINELKQM
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagttttattgagcgaaagaaatggatctcaaaagagacactgttcttctata
tcttccgatgatggaaggaagcgagttgataagacccgctcagcgatgctgacggatctt
gatattctcgactgtcccatttgctaccaagcattgaagattcctgtcttccagtgtgga
aatgggcatttggcctgttcttcttgctgtcccaaattgaggaataaatgtcctgcatgt
gctttgcctgttggacacattcgctgtagagcaatggagagagttcttgaatcagtcttg
gtcccatgccgatacgcagatttaggttgcaccaagacaatctattatgggagagaatca
acccatgagaagatatgcaacttctctccatgctcctgccctgtacaaggttgcaattat
actggctcatacaaggatctatacgagcactatgatcttactcacagtacaggtagcacg
gcttatagtttcaatggcgtttcctatatagccgcgatgatgttcatcagcgataagata
ctaattgaaagggtatatgagaagaaactattgtttgtagtgcagtgttttgaggagccg
tgtggtgtttatgtatctgtaagctgcattgcaccatctgctccagaagtaggagagttc
tcatatggtctcttgtacactacttgggaaggagtcactatgacttaccaatcaccaaag
gtgaaaaaggttcttaaagtgagctcccaaagacctaaagatagtttcatgttgatccct
cacagtttgttatgtggtccattgttagggatgatgctttgcatcaatgagttgaagcaa
atgtaa
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integrated database retrieval system
