Arabidopsis thaliana (thale cress): AT5G38530
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Entry
AT5G38530 CDS
T00041
Symbol
TSBtype2
Name
(RefSeq) tryptophan synthase beta type 2
KO
K06001
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00260
Glycine, serine and threonine metabolism
ath00400
Phenylalanine, tyrosine and tryptophan biosynthesis
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
ath01230
Biosynthesis of amino acids
Module
ath_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AT5G38530 (TSBtype2)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
AT5G38530 (TSBtype2)
Enzymes [BR:
ath01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
AT5G38530 (TSBtype2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-GeneID:
833841
NCBI-ProteinID:
NP_198669
TAIR:
AT5G38530
UniProt:
Q9FFW8
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All DBs
Position
5:15423980..15426576
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AA seq
506 aa
AA seq
DB search
MASQLLLPPNQFTKSVSPQVFITGDCQGFSDLTLKRKSNQATRVSNGSSLRVKAALRSTH
NKSVVEIPKQWYNLVADLSVKPPPPLHPKTFEPIKPEDLAHLFPNELIKQEATQERFIDI
PEEVLEIYKLWRPTPLIRAKRLEKLLQTPARIYFKYEGGSPAGSHKPNTAVPQAYYNAKE
GVKNVVTETGAGQWGSSLAFASSLFGLDCEVWQVANSYHTKPYRRLMMQTWGAKVHPSPS
DLTEAGRRILESDPSSPGSLGIAISEAVEVAARNEDTKYCLGSVLNHVLLHQTIIGEECI
QQMENFGETPDLIIGCTGGGSNFAGLSFPFIREKLKGKINPVIRAVEPSACPSLTKGVYA
YDFGDTAGLTPLMKMHTLGHDFIPDPIHAGGLRYHGMAPLISHVYEQGFMEAISIPQIEC
FQGAIQFARTEGIIPAPEPTHAIAATIREALRCKETGEAKVILMAMCGHGHFDLTSYDKY
LKGELVDLSFSEEKIRESLSKVPHVV
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggcctctcaattgcttttacctccaaaccaattcactaaatcagtctcacctcaagtt
ttcattactggtgattgtcaaggatttagtgacttaactctgaaaagaaaatcaaaccaa
gctacaagagtttcaaatggatctagcttaagagtaaaagcagctttgagatctactcac
aacaaatcagtggttgagattccaaaacaatggtataatcttgttgctgatctttcagtc
aagcctcctccaccgttgcatccaaagactttcgaaccgataaaacccgaagatttggct
catcttttccccaatgagttgattaaacaagaagctacacaagagaggtttattgatatc
cctgaggaagttcttgaaatctataagctttggcgtccaactcctctaatcagagcaaag
agattagagaagcttcttcaaacaccggcaaggatttacttcaagtatgaaggtggtagc
ccagctggttcacacaaaccaaacacagcggttccacaagcttattacaatgcgaaagaa
ggcgtcaagaacgttgtgacggaaaccggtgctggtcaatggggaagttctttagccttt
gcttctagtctatttggtctcgactgcgaagtatggcaagtagccaactcttaccataca
aagccatatcgccggttaatgatgcaaacttggggtgcaaaggttcatccgtcgccatcg
gatctcactgaggcgggtagaagaatcctcgaatccgatccatcaagtccgggaagttta
ggcattgcgatatcagaagcggttgaagttgcagcgagaaacgaggatacaaaatactgc
ctagggagtgtattgaaccatgtgttgttacaccaaacaattattggagaagaatgcatt
caacaaatggagaattttggtgaaacacctgacctgatcatagggtgtactggtggagga
tcaaattttgctggtttgagttttccttttatccgggagaaactcaaaggcaaaatcaac
cctgttataagagcggttgagccatctgcttgtccttccttgaccaaaggggtttatgct
tatgattttggcgatacggctggattgactcctttgatgaagatgcatactttgggacat
gacttcattcctgatcctatccatgccggtggattaaggtaccatgggatggcaccattg
atctcacatgtttatgaacaaggattcatggaagcaatttcaattcctcaaattgagtgt
ttccaaggtgctattcagtttgcaagaacagaagggatcatacccgcaccagaaccgacc
cacgccattgctgcaaccataagagaggctctccgatgtaaagagacgggagaagcaaaa
gtgatactaatggcgatgtgtggacatggccatttcgaccttacttcttacgacaagtat
ttaaaaggcgagttggtggatttatcattcagcgaagagaagatacgagagtctttgtcc
aaggttcctcatgttgtttaa
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