KEGG   Arabidopsis thaliana (thale cress): AT5G39500
Entry
AT5G39500         CDS       T00041                                 
Symbol
GNL1
Name
(RefSeq) GNOM-like 1
  KO
K18443  golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:ath00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    AT5G39500 (GNL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G39500 (GNL1)
Membrane trafficking [BR:ath04131]
 Endosome - Golgi transport
  Arf GTPases and associated proteins
   Arf GTPase associated proteins
    AT5G39500 (GNL1)
SSDB
Motif
Pfam: Sec7 Sec7-like_HUS TPR_28 Mon2_C Sec7-like_HDS DUF7117 TPR_LAA1_C
Other DBs
NCBI-GeneID: 833946
NCBI-ProteinID: NP_001318705
TAIR: AT5G39500
UniProt: Q9FLY5 A0A654G6L0
LinkDB
Position
5:15814559..15820151
AA seq 1443 aa
MGYQNHPSGSNSFHGEFKRCHSKPSKGAVASMINSEIGAVLAVMRRNVRWGVRYIADDDQ
LEHSLIHSLKELRKQIFSWQSNWQYVDPRLYIQPFLDVILSDETGAPITGVALSSVYKIL
TLEVFTLETVNVGEAMHIIVDAVKSCRFEVTDPASEEVVLMKILQVLLACVKSKASNGLS
NQDICTIVNTCLRVVHQSSSKSELLQRIARHTMHELIRCIFSQLPFISPLANECELHVDN
KVGTVDWDPNSGEKRVENGNIASISDTLGTDKDDPSSEMVIPETDLRNDEKKTEVSDDLN
AAANGENAMMAPYGIPCMVEIFHFLCTLLNVGENGEVNSRSNPIAFDEDVPLFALGLINS
AIELGGPSFREHPKLLTLIQDDLFCNLMQFGMSMSPLILSTVCSIVLNLYLNLRTELKVQ
LEAFFSYVLLRIAQSKHGSSYQQQEVAMEALVDLCRQHTFIAEVFANFDCDITCSNVFED
VSNLLSKNAFPVNGPLSAMHILALDGLISMVQGMAERVGEELPASDVPTHEERYEEFWTV
RCENYGDPNFWVPFVRKVKHIKKKLMLGADRFNRDPNKGLQYLQGVHLLPEKLDPKSVAC
FFRYTCGLDKNVMGDFLGNHDQFCIQVLHEFAKTFDFQNMNLATALRLFVGTFKLSGEAQ
KIHRVLEAFSERYYEQSPHILIDKDAAFVLAYSIILLNTDQHNAQVKTRMTEEDFIRNNR
TINGGADLPREYLSEIYHSIRHSEIQMDEDKGTGFQLMTASRWISVIYKSKETSPYIQCD
AASHLDRDMFYIVSGPTIAATSVVFEQAEQEDVLRRCIDGLLAIAKLSAYYHLNSVLDDL
VVSLCKFTPFFAPLSADEAVLVLGEDARARMATEAVFLIANKYGDYISAGWKNILECVLS
LNKLHILPDHIASDAADDPELSTSNLEQEKPSANPVPVVSQSQPSAMPRKSSSFIGRFLL
SFDSEETKPLPSEEELAAYKHARGIVKDCHIDSIFSDSKFLQAESLQQLVNSLIRASGKD
EASSVFCLELLIAVTLNNRDRILLIWPTVYEHILGIVQLTLTPCTLVEKAVFGVLKICQR
LLPYKENLTDELLKSLQLVLKLKAKVADAYCERIAQEVVRLVKANASHVRSRTGWRTIIS
LLSITARHPEASEAGFEALRFIMSEGAHLLPSNYELCLDAASHFAESRVGEVDRSISAID
LMSNSVFCLARWSQEAKNSIGETDAMMKLSEDIGKMWLKLVKNLKKVCLDQRDEVRNHAI
SMLQRAIAGADGIMLPQPLWFQCFDSAVFILLDDVLTFSIENSRKTLKKTVEETLVLATK
LMSKAFLQSLQDISQQPSFCRLWVGVLNRLETYMSTEFRGKRSEKVNELIPELLKNTLLV
MKATGVLLPGDDIGSDSFWQLTWLHVNKISPSLQSEVFPQEELDQFQRRNAKPEDPPVPG
NEV
NT seq 4332 nt   +upstreamnt  +downstreamnt
atggggtatcagaatcatccttcgggaagtaactcgttccatggagagttcaagagatgt
cactccaaaccgtctaaaggtgcggtggcgtccatgattaattctgaaattggtgcagtt
ttggctgtgatgaggagaaatgtacggtggggtgttcgatatatagcagatgatgatcag
ttagagcattctcttatccattctttgaaagaattgcgtaagcagatattttcatggcaa
agcaattggcaatatgttgaccctagattgtacatacagccctttttggatgttatattg
tctgatgaaactggtgctccgattactggcgttgctttgtcatctgtttacaagatctta
accctcgaagtttttactcttgaaactgtgaatgtgggagaggcaatgcatataatagtt
gatgctgtaaaaagctgtcgtttcgaggtaacggatcctgcctcagaggaagtggttttg
atgaagatacttcaagttctactggcttgtgtaaagagtaaggcgtctaatggattgagt
aatcaagacatttgcaccatcgtcaacacttgtttgcgtgttgttcatcaatcaagctcc
aaaagtgaattgttgcagcgtatagctcgccacacaatgcatgagttgattagatgtatc
ttctctcaacttccttttatcagccccttggctaatgaatgtgaattacatgtcgacaat
aaggtgggaacagtggactgggatccgaattctggagaaaaaagggttgaaaatggaaat
attgctagcatatctgatactctcggcactgacaaagatgatccaagttctgaaatggtt
attccagagacagatcttagaaatgatgaaaagaaaaccgaggtcagcgatgacttgaat
gctgctgcaaatggtgaaaatgcaatgatggcgccttatggtataccatgcatggtagag
atttttcatttcttgtgtaccctgttgaatgttggagaaaacggtgaagtcaattccaga
tccaacccaatagcgtttgatgaagatgttcctcttttcgctctgggtttaattaattct
gctatagaacttggagggccttctttccgtgagcacccaaagctgttgactttgattcag
gatgatttattctgtaacttgatgcagtttggtatgtccatgagccctctgattctttct
acagtttgcagcatcgttcttaatctctacctgaatctccgtactgagcttaaggtacag
cttgaagctttcttttcatatgtacttctgaggattgcacagagcaaacatggctcttct
tatcagcaacaggaggttgctatggaggctctggttgatctttgcagacaacatactttc
atagctgaagtgtttgcaaatttcgattgtgatataacttgcagtaatgtgtttgaagat
gtttcaaacctgctatcaaagaatgccttcccagttaatgggcctttatctgctatgcat
atacttgcattggatgggttaatttctatggttcagggaatggctgagagagtgggtgaa
gaattgccggcttcagatgttcctacacatgaagaacgatatgaagaattctggacagtg
agatgtgagaattacggagatcctaatttttgggttccctttgtccgaaaggtcaagcat
ataaagaaaaagctgatgcttggggctgatcgttttaaccgtgatcctaataaaggctta
cagtatcttcaaggggtgcacttgttgcccgagaaacttgatccaaagagtgtggcatgt
ttcttcaggtatacatgtgggttagataagaatgttatgggagatttcctcggaaatcat
gaccagttctgtattcaggtgcttcatgagtttgccaagacgttcgacttccagaacatg
aatcttgctacagccctgcgtctttttgtgggtacctttaaattgtctggcgaggcacag
aagatacacagggtactggaggcgttttctgagagatactatgagcagtcaccacacata
ctgattgataaagatgctgccttcgtgttagcttactcgattatcttgctgaacacagat
cagcacaacgcccaggtgaaaacaaggatgactgaagaagatttcatccgtaacaacagg
acaataaatggaggcgcagaccttcctagagagtacctatctgagatttatcactcaatc
cgccacagtgagattcagatggacgaagataaaggaaccggcttccaactgatgacagcc
agtcgttggattagtgtgatttacaaatccaaagaaacgagtccctatatccaatgtgac
gcagcatcccatctggaccgtgacatgttttatatcgtgtctggtcccactattgctgct
acatcagtggtttttgagcaagcagagcaagaagatgttttgcggagatgtattgatggg
ttattggccattgcaaaactttcagcatattatcatttgaatagtgttttggatgatctg
gtcgtgtctctctgcaaattcacacccttcttcgccccattatctgctgatgaagctgtt
cttgttctaggagaagatgccagagccagaatggctactgaagctgttttcttgattgca
aataaatatggtgactatattagtgcgggctggaaaaacatactggaatgtgtcttgagc
ctcaacaaactccacattttaccagatcatatagctagtgatgcagcggatgacccagag
ctgtcaactagtaacttggagcaagaaaaaccttcggcaaatcccgtgccagtcgtatca
cagtcacaaccctcagcgatgcctcgaaaatcatctagttttattggtcggtttcttctg
tcttttgattctgaggaaacaaagccattaccaagcgaggaagaattggcagcttataaa
cacgctcgtgggatagtgaaagattgtcatattgatagcatattctcagacagcaagttt
ctccaagctgagtctctgcagcagcttgttaactctcttataagagcatccgggaaagat
gaagctagttcggtcttttgcctggagcttctgattgcggtaacgctgaacaaccgagac
agaatcctactgatttggccaacagtttatgagcatatcttgggtatagttcaattaaca
ttaacaccatgcacgcttgttgaaaaggctgtttttggtgtactgaagatttgccagaga
ttattaccatacaaggaaaacctaacagatgaacttctgaaatcactccaactggttctc
aagctgaaagcaaaagtggctgatgcatactgtgaacgcattgcacaagaagttgttcgt
cttgtaaaagcaaacgcatctcacgttagatcccgtactggttggcgaacgattatatct
ctgctatcaatcacagctcggcatccagaagcttctgaagctggattcgaagccctccgg
tttataatgtcagaaggagctcacttgttaccatcaaactacgagctctgtttggatgca
gccagtcactttgctgaatcccgagttggtgaagtcgatcggtctatctcagcaattgac
ttaatgtcaaactctgtgttttgtcttgcaagatggtctcaagaggcgaaaaactcgatt
ggtgaaactgatgctatgatgaaactaagtgaagatattggaaaaatgtggctcaaactt
gtgaagaacctcaaaaaagtatgtcttgatcaacgcgacgaagtgagaaaccatgcaatc
tcaatgctgcaacgagctatagccggtgcagacgggatcatgttaccacaacctctatgg
ttccaatgctttgattccgcagtcttcatattgctagacgatgtgctcactttttcgatc
gagaattcaaggaagactctcaagaaaacagtggaagaaacgcttgttctcgccacaaag
ctcatgtcaaaagcttttctgcaatctcttcaagacatctcacagcaaccatcattctgc
agactttgggttggtgtcttaaaccgtttggaaacgtacatgtcaactgaattcagagga
aaacgcagcgagaaagtcaatgaactcatcccggaactgctcaagaacacattactggta
atgaaggcgacgggagttttattaccaggtgatgatatcggaagtgacagtttctggcaa
ctaacgtggcttcacgttaataagatctctccttctcttcaatctgaagttttccctcaa
gaggagcttgatcagtttcagagacgaaacgcgaagcctgaggatcctccggtaccggga
aatgaggtctga

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