Arabidopsis thaliana (thale cress): AT5G40890
Help
Entry
AT5G40890 CDS
T00041
Symbol
CLC-A
Name
(RefSeq) chloride channel A
KO
K05016
chloride channel 7
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT5G40890 (CLC-A)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G40890 (CLC-A)
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ath04040
]
AT5G40890 (CLC-A)
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
AT5G40890 (CLC-A)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
AT5G40890 (CLC-A)
Ion channels [BR:
ath04040
]
Chloride channels
Chloride channel (CLC)
AT5G40890 (CLC-A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Voltage_CLC
CBS
Motif
Other DBs
NCBI-GeneID:
834090
NCBI-ProteinID:
NP_198905
TAIR:
AT5G40890
UniProt:
P92941
A0A5S9Y9U9
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(16381314..16385424)
Genome browser
AA seq
775 aa
AA seq
DB search
MDEDGNLQISNSNYNGEEEGEDPENNTLNQPLLKRHRTLSSTPLALVGAKVSHIESLDYE
INENDLFKHDWRSRSKAQVFQYIFLKWTLACLVGLFTGLIATLINLAVENIAGYKLLAVG
YYIAQDRFWTGLMVFTGANLGLTLVATVLVVYFAPTAAGPGIPEIKAYLNGIDTPNMFGF
TTMMVKIVGSIGAVAAGLDLGKEGPLVHIGSCIASLLGQGGPDNHRIKWRWLRYFNNDRD
RRDLITCGSASGVCAAFRSPVGGVLFALEEVATWWRSALLWRTFFSTAVVVVVLRAFIEI
CNSGKCGLFGSGGLIMFDVSHVEVRYHAADIIPVTLIGVFGGILGSLYNHLLHKVLRLYN
LINQKGKIHKVLLSLGVSLFTSVCLFGLPFLAECKPCDPSIDEICPTNGRSGNFKQFNCP
NGYYNDLSTLLLTTNDDAVRNIFSSNTPNEFGMVSLWIFFGLYCILGLITFGIATPSGLF
LPIILMGSAYGRMLGTAMGSYTNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLELTNNLL
LLPITMFVLLIAKTVGDSFNLSIYEIILHLKGLPFLEANPEPWMRNLTVGELNDAKPPVV
TLNGVEKVANIVDVLRNTTHNAFPVLDGADQNTGTELHGLILRAHLVKVLKKRWFLNEKR
RTEEWEVREKFTPVELAEREDNFDDVAITSSEMQLYVDLHPLTNTTPYTVVQSMSVAKAL
VLFRSVGLRHLLVVPKIQASGMSPVIGILTRQDLRAYNILQAFPHLDKHKSGKAR
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagatggaaacttgcagattagtaatagtaattacaatggagaagaagaagga
gaagatccagagaacaacactttgaatcaaccactgcttaagagacatagaactctttct
tcaactcctcttgctttggtcggtgccaaggtttcacacatcgagagtttagattatgaa
ataaacgagaatgatctgttcaagcatgactggagaagcagatcaaaagcacaagtgttt
caatacatattcttaaaatggacattagcttgtcttgttggtctcttcactggtcttatc
gctactctcatcaaccttgctgtcgaaaacatcgccggttacaaacttctcgccgtcggc
tactacattgctcaagataggttttggacaggtctgatggtctttacgggggcgaatttg
ggtctgactttggtggcgacagtacttgttgtttactttgctcctacggcggctggtccg
gggatccctgagattaaagcttaccttaatggcattgacactcccaatatgtttggtttt
accaccatgatggttaagattgttggaagtattggagcggttgcagctggacttgatctt
ggtaaagaagggccattggttcatattggaagttgcatagcttctttgcttggtcaaggt
ggtccagataatcacagaatcaaatggagatggcttcgttacttcaacaacgatagagat
cgaagagatcttattacatgtggatctgcctctggagtatgtgctgctttcaggtcacca
gtaggaggagtacttttcgctcttgaggaagtcgctacgtggtggagaagcgctctcttg
tggagaacattcttcagtacagccgttgtggtggttgtattaagagcgttcattgagatt
tgtaactccgggaaatgcggacttttcggctcaggaggactcattatgttcgatgtgagt
catgtagaggttaggtaccacgcagcagatataatcccagtcacattgattggagtcttt
ggtggcattcttggaagcttgtacaatcatcttctgcataaagttctccggctttacaat
ctcatcaaccagaagggaaagattcataaggtgcttctaagtcttggggtatctctattc
acatcagtttgcttgttcggtcttcctttcttagcggaatgcaagccttgtgatccttct
atagacgagatatgtccaacaaacggaagatcaggaaatttcaagcaattcaactgtcca
aatggttattacaacgatctatccactctgcttctcacaaccaatgatgatgcagtcaga
aacattttctcttcaaacactcctaatgagtttggcatggtttctctctggatattcttt
ggcctctactgcattttgggtcttataacattcggtatagcgacaccgtcgggtctcttc
ctaccgattatcctcatgggttctgcatacggtaggatgctaggcacagcaatggggtct
tacacaaacatagatcaagggctttacgcggttcttggtgcagcttcactcatggctggt
tcaatgagaatgactgtttcactctgtgttatatttctggaactcaccaacaaccttctt
ttgttgcccattacaatgtttgtgcttctgatagctaaaacagtaggtgacagcttcaat
ctaagtatctacgagatcattctccatcttaagggcttacctttcttggaagcaaatcca
gagccgtggatgaggaatctcactgtaggtgagcttaacgacgctaagcctccggttgta
acacttaacggagtagaaaaagtggcaaatatagtcgatgtactaaggaacacaacgcat
aacgcattcccagtcttggatggagcagatcaaaacactggcacagagctccatggtctg
atcctaagagctcaccttgtgaaagttctgaaaaagagatggttcttgaatgagaaaagg
agaacagaagagtgggaagttagggaaaagttcacaccggttgaattagctgagagagaa
gataacttcgatgatgttgcaatcacaagctcagagatgcaattgtatgttgatcttcat
cctttgaccaacactacaccttacacagtggtgcaaagtatgtcagtggctaaagctttg
gttctgttccggtcagtgggtctcagacatttactggtggttcccaagattcaagcttca
gggatgtcacctgtgatagggatcttaacaaggcaagatctcagggcttataacattcta
caagcatttcctcacttggataaacacaaaagtggaaaagctagatga
DBGET
integrated database retrieval system
