Arabidopsis thaliana (thale cress): AT5G41360
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Entry
AT5G41360 CDS
T00041
Symbol
XPB2
Name
(RefSeq) homolog of Xeroderma pigmentosum complementation group B 2
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03022
Basal transcription factors
ath03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AT5G41360 (XPB2)
09124 Replication and repair
03420 Nucleotide excision repair
AT5G41360 (XPB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G41360 (XPB2)
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G41360 (XPB2)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AT5G41360 (XPB2)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AT5G41360 (XPB2)
DNA repair and recombination proteins [BR:
ath03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AT5G41360 (XPB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
834138
NCBI-ProteinID:
NP_568591
TAIR:
AT5G41360
UniProt:
Q9FUG4
A0A178UFA0
LinkDB
All DBs
Position
5:16544333..16549327
Genome browser
AA seq
766 aa
AA seq
DB search
MGNDERKRPTKKMKYGGKDDQKMKNIQNVEDYYDDADEDSRDGEGEEKRRDFTDLELKPD
HGNRPLWACADGKIFLETFSPLYKQAYDFLIAIAEPVCRPESMHEYNLTPHSLYAAVSVG
LETETIISVLNKLSKTKLPGEIIDFIHASTANYGKVKLVLKKNRYFIESPFPEVLKRLLS
DDVINRARFTSEPYYGGDGFTIGKTSGELEAGPGELLNEAELAAAAEEKETHSFEIDPAL
VENVKQRCLPNALNYPMLEEYDFRNDNVNPDLDMELKPHAQPRPYQEKSLSKMFGNGRAR
SGIIVLPCGAGKSLVGVSAAARIKKSCLCLATNAVSVDQWAYQFKLWSTIKDDQICRFTS
DSKERFRGNAGVVVTTYNMIAFGGKRSEEAEKIIEEMRNREWGLLLMDEVHVVPAHMFRK
VISITKSHCKLGLTATLVREDEKITDLNFLIGPKLYEANWLDLVKGGFIANVQCAEVWCP
MTKEFFAEYLKKENSKKKQALYVMNPNKFRACEFLIRFHEQQRGDKIIVFADNLFALTEY
AMKLRKPMIYGATSHIERTKILEAFKTSKTVNTVFLSKVGDNSIDIPEANVIIQISSHAG
SRRQEAQRLGRILRAKGKLEDRMAGGKEEYNAFFYSLVSTDTQEMYYSTKRQQFLIDQGY
SFKVITSLPPPDAGSSLGYHSQEEQLSLLGKVLNAGDDMVGLEQLEEDTDGKALKTRRSM
GSMSAMSGANGRVYMEYNSGRQKSGNQSKKPKDPTKRHNIFKKRYV
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgggaaacgatgaaagaaaacgacctacaaagaagatgaagtacggtgggaaggatgat
caaaagatgaagaacatacaaaacgttgaagattactatgatgatgctgatgaggattct
cgtgatggtgaaggagaggagaagaggagagattttactgatttggagttgaagccggat
catggaaataggcctttgtgggcttgtgctgatggaaagattttcttggagacattttct
cctctctataaacaagcttatgactttcttatcgccattgctgaacccgtttgcaggcct
gagtcaatgcacgagtataatttaaccccacactcgttgtatgctgctgtttccgttggt
cttgagacagaaactatcatctctgttttgaataagctatctaagaccaagctacccggg
gagatcattgatttcatccatgcttctactgctaattatgggaaagtgaagttggtattg
aagaaaaatcggtattttattgaatcaccattcccggaggtgttgaaaaggcttctcagt
gatgatgtcataaatcgagcaagatttacttctgagccatattatggtggtgatggattt
acgatcggcaaaacaagtggtgaacttgaagcaggacctggggagttgttgaatgaagca
gaattggcagcagcagcagaagagaaagaaactcactcatttgagatagaccctgcactg
gtggagaatgttaagcagcgttgcttgccaaatgccttgaattaccctatgttagaggaa
tatgacttcaggaacgataatgttaatcctgatcttgacatggaactgaagccccatgca
caaccaaggccataccaggaaaaaagtttgagcaaaatgtttggaaacggacgagcaaga
tctgggattatagtgttaccttgtggagctggtaaatctctagttggtgtttctgcagcg
gctcgtataaagaagagttgtctttgtttggcaacgaatgctgtctcggtggatcaatgg
gcctaccaatttaagttgtggtctactataaaagatgaccaaatatgccgtttcacttct
gatagtaaagaacgattccgtggaaatgctggtgttgttgtgacaacctataatatgatt
gcctttggtggtaaacgatctgaagaagcagagaagattatagaagaaatgagaaacaga
gagtgggggttgctgcttatggacgaggtgcatgtggttccagcccatatgtttaggaaa
gttatcagtattacaaaatctcactgcaagctaggacttacagccacccttgtgagagaa
gacgaaaaaattacagatttaaacttcctcattggcccgaaactctatgaagccaattgg
ctagatttagttaaaggaggctttattgcaaatgttcagtgtgctgaagtatggtgtccc
atgaccaaagagttttttgcagaatatctgaagaaagagaactcgaaaaaaaaacaggcg
ctttatgtcatgaaccctaacaagttcagagcctgtgaatttttgatacgtttccatgaa
caacaacgtggggataaaatcatcgtctttgcagacaatctttttgcacttacagagtat
gcaatgaaactccggaaaccgatgatttacggtgcaaccagccatatcgaacgaacaaaa
attctcgaggcgtttaaaaccagtaaaaccgtgaacactgtattcctgtcaaaggttggt
gataactccatagatatccctgaagcgaatgtgatcatccagatttcgtcacatgctggt
tctagacgtcaagaggctcaacgtttgggtcgtatccttagggctaagggtaaacttgaa
gatagaatggctggtggaaaagaagagtacaatgcattcttctactcgcttgtttctacc
gatacacaggaaatgtattattcaacgaaaagacagcagtttttgatcgaccaaggttat
agcttcaaggtaataacaagcctcccacctccggacgcgggttcaagcttgggctaccac
agtcaagaagaacagttgtctcttctcggaaaggtgttgaatgctggagacgatatggtt
ggtttagaacaacttgaagaagacacagatggaaaggctctaaagacgcgacgaagcatg
ggatcgatgagtgcaatgtccggtgcaaatggaagggtctacatggaatacaactcaggt
cgtcaaaaatctggtaaccaatccaagaaacctaaagacccaaccaaacgacacaatatc
ttcaaaaaacgttatgtttga
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integrated database retrieval system
