Arabidopsis thaliana (thale cress): AT5G41580
Help
Entry
AT5G41580 CDS
T00041
Name
(RefSeq) RING/U-box superfamily protein
KO
K04706
E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G41580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G41580
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ath04812
]
AT5G41580
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
AT5G41580
Cytoskeleton proteins [BR:
ath04812
]
Eukaryotic cytoskeleton proteins
Septins
Septin associated proteins
AT5G41580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MIZ
zf-Nse
zf-4CXXC_R1
zf_DPOE_2
Motif
Other DBs
NCBI-GeneID:
834160
NCBI-ProteinID:
NP_198973
TAIR:
AT5G41580
UniProt:
F4JYG0
A0A178UGV0
LinkDB
All DBs
Position
5:complement(16626185..16630820)
Genome browser
AA seq
760 aa
AA seq
DB search
MSTAAAARPVAGTGLREKTAASLVNSFRLASVTQRLRYHIQDGAKVDPKEFQICCISFAK
GIDFAIANNDIPKKVEEFPWLLKQLCRHGTDVYTKTALMVLMISVKHACHLGWFSDSESQ
ELIALADEIRTCFGSSGSTSPGIKSPGSTFSQIMERFYPFVKLGHVLVSFEVKAGYTMLA
HDFYISKNMPHSLQEKIRLFVAQTDNIDTSACISNPPEVSFLLNGKGVEKRVNIAMDTGP
QLPTNVTAQLKYGTNLLQVMGNFKGNYIIIIAFTGLVVPPEKPVLKDYLQSGVIEASPDS
DIIEGPSRVSLSCPISRKRIKLPVKGQLCKHLQCFDFSNYVHINMRNPTWRCPHCNQPVC
YPDIRLDQNMAKILKDVEHNAADVIIDAGGTWKVTKNTGETPEPVREIIHDLEDPMSLLN
SGPVVFDLTGDDDAELEVFGDNKVEDRKPCMSDAQGQSNNNNTNKHPSNDDYSSIFDISD
VIALDPEILSALGNTAPQPHQASNTGTGQQYSNLSQIPMSIDPMPVPVPFSQTPSPRDRP
ATTSTVFTIPNPSPQYSQVHASPVTPTGTYLGRTTSPRWNQTYQSQAPPMTTPYTSRKVS
VPVTSQSPANVSSFVQSQHVPRVLSQPNNYGVRGLTSSHASTSRQHPSGPTVQSVSRLSD
LVDVDLTVPDTSNWRPRMRGSLVPGSHSTALDHMIIRPSQQSQTSTRLNSSQPVQTPSVQ
TSQAQSPFTTAAYRTETVLGNRNHPVPAPPGIVRPTGPTS
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgtctacggcggcagcggctcgtccggtggctggaactggcttacgggagaagacggca
gcgtcactggtcaattccttccgattagcgtcggtgactcaacgtttacgttaccacatt
caagacggagctaaggttgatcctaaggagtttcaaatctgttgcatctctttcgctaaa
ggcattgattttgctatagcgaataatgatattcctaagaaggttgaggagtttccgtgg
ttactcaaacagttgtgcagacatggaactgatgtgtacactaagacggcgcttatggtg
ctgatgatctctgttaagcatgcttgtcatttgggatggttttcggatagcgagagtcaa
gaacttatcgctctagctgatgagataaggacttgttttgggagttctggaagcactagc
cctggtatcaaaagtcctggcagtacattttcgcagatcatggagaggttctatccattt
gtaaagcttgggcatgttcttgtttcttttgaagtgaaggctggctatacaatgctggcg
catgatttttatatctcaaagaatatgccacattcactccaagagaaaattcggttattt
gttgcccagacagacaacatagacacgtctgcctgtatttcaaatcctccagaagtcagc
ttcttgctaaatggaaagggggttgagaagagagtcaatatcgcaatggatacagggcct
caactccctacaaatgttactgcacagctgaaatatggaactaatcttctccaagtgatg
gggaattttaaaggaaattacatcatcataattgcttttacgggactggtagtgccacct
gaaaaaccggttcttaaagattaccttcagtccggagtcattgaagcaagtccagattca
gacatcattgaggggccatcacgagtatctctcagttgccctataagtcgcaagcggatc
aagctaccagtcaagggccagttatgtaaacatcttcagtgttttgatttctcaaactac
gttcacataaatatgaggaacccaacctggcgctgcccgcattgcaatcaacctgtttgc
taccctgacattcgtttagatcaaaacatggccaagatattaaaagatgtggaacacaat
gctgctgatgtaatcatcgatgctggtggtacatggaaggttacaaaaaatactggcgag
accccggaacctgtgcgtgagatcattcatgatctagaagacccgatgagcttattaaac
tctggtcctgttgttttcgatcttacgggggatgatgatgctgaactggaagtttttggt
gacaacaaggttgaggaccggaagccctgtatgtctgatgctcagggtcaatctaataat
aacaacacaaataaacatccttcaaacgatgattactcttcgatatttgatatctctgat
gtgatcgcacttgacccggagattttatctgctttgggaaacactgcgccacaaccgcat
caagcttcgaatactggaactggtcaacaatattcaaacttatcccaaataccaatgtcc
atagatccaatgccggtacctgtaccattctcgcagacaccatctccaagagatagacca
gcaactacttccactgtcttcaccataccgaatccctctccacaatactctcaggttcat
gcttcacctgttacacccaccggaacatatcttggtagaaccactagtccgagatggaac
cagacttatcaatctcaagcgccaccaatgacaactccatatacgagccggaaggtctca
gttccagtaacgagccagtcgccagcgaatgtatcctcttttgttcagtctcagcatgtc
cctagagtactcagccagcctaataattatggcgtcagaggtttaaccagtagccatgca
agcacttcaaggcagcacccaagtggtcccactgttcaatctgtttctcgattaagtgac
ctagtggatgtagacttgacggttcctgatacatccaactggcgcccgaggatgcgagga
agtcttgtgcccggttctcattccactgctcttgaccacatgatcatccgacctagccaa
cagtctcaaacttccactaggctgaatagttcacagccggttcagacaccatcggttcaa
acgtctcaagctcagtcaccttttacaacggctgcctatagaaccgagacagttttagga
aaccgaaaccatccggtgcccgctcctcctggcattgttaggcctactggaccgacatct
tga
DBGET
integrated database retrieval system
