Arabidopsis thaliana (thale cress): AT5G42325
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Entry
AT5G42325 CDS
T00041
Name
(RefSeq) Transcription factor IIS protein
KO
K03145
transcription elongation factor S-II
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT5G42325
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
AT5G42325
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TFIIS_M
Siah-Interact_N
DUF4411
Motif
Other DBs
NCBI-GeneID:
834238
NCBI-ProteinID:
NP_680377
TAIR:
AT5G42325
UniProt:
F4K1I5
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Position
5:complement(16924102..16924851)
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AA seq
233 aa
AA seq
DB search
MQRREFLELFEAALRAAKSVKGAESSPEVLRFVDAMNRLKEAPKSLVCDVVCKTSMGKGL
GFFIDHKNPKIRSEGRILRDLWMKIHYASGREKSRDRETPVKIPTHSTMKKTGDSKRDKV
HEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAMSILFNMGDSNNPDLRRKVL
IGEISGERLVKMEKDEMGSEKIQKEVQRIKERARFKEESRMKMLLASADMIMT
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgcagaggcgagagttcttggagttgttcgaggcagcacttagagcggctaagtctgtg
aaaggtgctgagagttctccagaggtattgaggtttgtcgatgctatgaatcgtttgaag
gaagcacctaagtcacttgtttgtgacgtggtctgcaaaacctccatggggaagggtttg
ggattcttcattgatcacaaaaaccctaaaattcgatcggaaggaaggattcttcgggat
ctttggatgaagattcattatgcttcaggtagagaaaagagtcgtgatagagaaactccg
gtgaagattccgacgcattcaacgatgaagaagactggagattcaaaacgagataaagtg
catgagattcttcaatcatctttggctaaagtcgctactgaggttgttgacacggagatg
aagagacgagtcatgactgtttgtgatccttgggttgtggctgtatctgtggaatctgca
atgtcgattctgttcaacatgggagatagtaacaatccagatttgaggaggaaagtgtta
attggtgagatcagtggggagagattagtgaagatggagaaagacgagatggggagtgag
aagattcagaaggaggttcaaaggattaaagagagagcaagatttaaggaagagagtcgc
atgaagatgcttcttgcatcagcagatatgatcatgacttag
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