Arabidopsis thaliana (thale cress): AT5G42970
Help
Entry
AT5G42970 CDS
T00041
Symbol
COP8
Name
(RefSeq) Proteasome component (PCI) domain protein
KO
K12178
COP9 signalosome complex subunit 4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G42970 (COP8)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
AT5G42970 (COP8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PSMD12-CSN4_N
PCI
CSN4_RPN5_eIF3a
Motif
Other DBs
NCBI-GeneID:
834312
NCBI-ProteinID:
NP_199111
TAIR:
AT5G42970
UniProt:
Q8L5U0
A0A384KTP3
Q1H5B6
LinkDB
All DBs
Position
5:complement(17237153..17240816)
Genome browser
AA seq
397 aa
AA seq
DB search
MDEALTNASAIGDQRQKIEQYKLILSSVLSSNDLLQAQRFIDHILSDDVPLVVSRQLLQS
FAQELGRLEPETQKEIAQFTLTQIQPRVVSFEEQALVIREKLAGLYESEQEWSKAAQMLS
GIDLDSGMRAVDDNFKLSKCIQIARLYLEDDDAVNAEAFINKASFLVSNSQNEVLNLQYK
VCYARILDMKRKFLEAALRYYGISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQ
RSRVLATLYKDERCSKLKIYPILQKVYLERILRRPEIDAFSEELRPHQKASLPDKSTVLD
RAMIEHNLLSASKLYTNIRFDELGTLLAIDPRKAEKIAANMIGQDRMRGSIDQEEAVIHF
EDDVEELQQWDQQISGLCQALNDILDGMAKKGMSVPV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagctttgacgaacgcttctgcaatcggtgaccaacgccagaaaatcgaacag
tacaaactcatcctctcctctgttctctcttccaacgatcttctccaagctcagagattc
atcgatcacattctttccgatgatgtcccgttggtggtttcgaggcagcttttgcagtct
ttcgcacaagagcttgggagattagaaccggagacgcagaaggagattgctcaatttact
cttacccagattcagcctagagttgtttcctttgaggaacaggcacttgttatcagagaa
aaacttgcgggtttgtatgaatcagagcaggaatggtcaaaagcagcacagatgttgagt
ggaattgatctggattctggaatgagggccgttgacgacaacttcaagctttcaaagtgt
atccaaattgctcgtttgtatctcgaggatgatgatgctgtaaatgcagaggcttttata
aataaagcttctttcttagtgagcaatagtcagaatgaagttttgaatttgcagtacaag
gtctgctatgctagaattttggacatgaaaagaaagtttttagaggctgcacttcggtat
tacggcatatctcagattgagcaacgccaaataggggatgaagagattgatgagaatgct
ttagagcaggccctatcagctgctgtcacatgtaccatattagctggagctggtcctcag
cgttctcgtgttcttgcaactttatacaaagatgagcgttgctccaagctgaagatttat
cctatcctgcagaaggtgtatctggaaaggattttaaggagaccagagattgatgccttt
tcagaagaactaaggccacatcagaaagcatctttgcctgacaaatccactgttcttgac
cgtgctatgattgagcataaccttcttagtgcaagcaaactctacacaaacataaggttt
gatgaattgggaactctgttggcgattgatccaagaaaagcggagaagatagcagctaat
atgattgggcaagaccgaatgaggggttccatagatcaggaggaggctgtgattcatttt
gaggatgacgtggaggaactacaacaatgggatcaacagatatcgggattatgccaagct
ctcaatgacattctggatgggatggccaagaaaggcatgtctgttcctgtctga
DBGET
integrated database retrieval system
