Arabidopsis thaliana (thale cress): AT5G44090
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Entry
AT5G44090 CDS
T00041
Name
(RefSeq) Calcium-binding EF-hand family protein
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
ath04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT5G44090
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
AT5G44090
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ath01009
]
AT5G44090
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G44090
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G44090
Protein phosphatases and associated proteins [BR:
ath01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
AT5G44090
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
AT5G44090
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
AT5G44090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_5
EF-hand_8
Motif
Other DBs
NCBI-GeneID:
834432
NCBI-ProteinID:
NP_199222
TAIR:
AT5G44090
UniProt:
Q9XGR4
A0A178UDP7
LinkDB
All DBs
Position
5:complement(17742765..17748526)
Genome browser
AA seq
538 aa
AA seq
DB search
MEIDGGNDVQILDPELLQLPGLSPVSLKENPHIAEELFSQWLSLPETGRLVKSLIDDTKS
STPVSVSKNCTSLNVACGSALPSVFLNSGTPPLSPRGSPGSPRFSRQKTSPSLQSPLKSV
REPKRQLIPQFYFQHGRPPAKELREQCISMVDQFFSNYIDGLHMDEFKSITKEVCKLPSF
LSSVLFRKIDTSGTGIVTRDAFIKYWVDGHMLAMDVASQIYNILRQPGCKYLRQADFKPV
LDELLTTHPGLEFLRNTPEFQERYAETVIYRIFYYINRSGTGCITLRELKRGNLITAMQQ
VDEEDDINKVIRYFSYEHFYVIYCRFWELDGDHDFLIDKENLIKYGNHALTYRIVDRIFS
QVPRKFTSKVEGKMSYEDFAYFILAEEDKSSEPSLEYWFKCIDLDGDGVITPNEMQFFYE
EQLHRMECITQEPVLFEDILCQIFDMIKPEKENCITLQDLKASKLSGNIFNILFNLNKFM
AFETRDPFLIRQERENPTLTEWDRFAQREYVRLSMEEDVEEVSNGSADVWDEPLESPF
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcgatggtggaaacgatgttcagattttggatcctgagctcttgcagcttccc
ggtttgtctcctgtatcacttaaagaaaatcctcatattgctgaagaactcttctcccag
tggctttcacttcctgaaactggccgattggtcaagtctttaattgatgatactaaatct
agtaccccagtcagtgtatccaaaaattgtactagtctcaatgttgcttgcgggagtgca
ttgccatctgtttttctgaacagcggcactcccccactatccccacgaggctcacctggg
tctccccgtttctcgaggcaaaagacaagcccttctctacagtctcctctgaaatcagtc
agggaaccaaagcgccaactcattccacagttttacttccaacatggacgtccacctgcg
aaggaactaagggagcaatgtatatccatggttgatcaattttttagtaactatatagac
ggacttcatatggatgaattcaaatccattactaaagaagtctgcaagctgccttctttt
ctttcctctgtactatttagaaagatagacacgagtggcaccggtatcgttacaagggat
gcatttatcaagtattgggttgatggacatatgttggcaatggacgtagcctcacagata
tataatattttaaggcagccaggttgcaagtaccttagacaggctgacttcaaaccagtt
cttgatgagcttctgacaactcatcccggcttggaattcctgaggaatacacctgagttt
caagaaagatatgctgagaccgtcatctacagaatattttactacataaacagatcaggt
actggttgcattactcttagagagctgaagcgtgggaatcttattactgccatgcaacaa
gttgatgaagaagacgacatcaataaagttattaggtacttctcctatgagcatttctac
gtgatatactgcagattttgggaactcgatggcgaccatgatttccttattgataaggaa
aatctcatcaaatatggtaatcatgcccttacctacaggattgtcgacagaatattttca
caggttcctaggaaatttacaagcaaagttgaggggaagatgagttatgaagattttgca
tactttattctcgctgaggaggataagtcatctgagcctagtcttgagtattggttcaag
tgcatagacctagatggagatggggtgatcactcccaacgagatgcagtttttctacgaa
gagcagctgcatcgcatggaatgtataacccaggaacctgtactctttgaagatatccta
tgtcaaatattcgacatgattaaaccagagaaggagaactgcatcacactccaggatctg
aaagcatccaaactttctggaaatattttcaatatactctttaacctgaacaaattcatg
gcgtttgaaacccgtgacccttttctcattcgtcaggaacgtgagaatccaacattgacg
gaatgggaccgatttgctcagagagagtatgtgaggttgtcaatggaggaagatgtggag
gaagtctcgaatgggagtgcagatgtttgggatgaaccactcgaatctccattttag
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