KEGG   Arabidopsis thaliana (thale cress): AT5G44200
Entry
AT5G44200         CDS       T00041                                 
Symbol
CBP20
Name
(RefSeq) CAP-binding protein 20
  KO
K12883  nuclear cap-binding protein subunit 2
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03013  Nucleocytoplasmic transport
ath03015  mRNA surveillance pathway
ath03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    AT5G44200 (CBP20)
  09122 Translation
   03013 Nucleocytoplasmic transport
    AT5G44200 (CBP20)
   03015 mRNA surveillance pathway
    AT5G44200 (CBP20)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G44200 (CBP20)
   03041 Spliceosome [BR:ath03041]
    AT5G44200 (CBP20)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Cap binding complex
     AT5G44200 (CBP20)
Spliceosome [BR:ath03041]
 Common components
  Common spliceosomal components
   Cap binding complex
    AT5G44200 (CBP20)
SSDB
Motif
Pfam: RRM_1 DUF5721
Other DBs
NCBI-GeneID: 834443
NCBI-ProteinID: NP_001078705
TAIR: AT5G44200
UniProt: Q9XFD1
LinkDB
Position
5:complement(17801737..17804203)
AA seq 257 aa
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR
RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFR
ESGDSDDDGEDDRKRRS
NT seq 774 nt   +upstreamnt  +downstreamnt
atggcttctttgttcaaggagcaagcaaagctatcagcttatcgtgatagaagattttca
ggaacacaagaggagtttgatgaagcgctaagagcatctacaacggtttacattggcaat
gtgtctttttacactactgaagaacagctttacgagcttttctctagagctggagaaatc
aaaaagatcatcatgggtttggataagaacactaaaacaccttgtggcttttgtttcgtc
ctgttctactctagagaggatactgaagatgcagtcaagtatataagtgggactattctc
gatgaccggcctattcgtgtggattttgattggggattccaagaaggaagacaatggggc
cgtggtagaagcggtggccaggttcgtgatgaataccgtacagattacgatcctgctaga
ggtggttatgggaaattagttcagaaggaactcgaagcacaaaggcagctcgtggattac
ggtactggctcattgggagcttatcctcaagctgcgccaacgaattatggaaatggaagg
cgtggtggtggaaactatggtcaaggaggacaaaatcgccatggaagaggagactaccat
cggaaacgacaaagagacgatgatcgctatggccgcgataactcaagaagaaacacagat
catgagtctaggagagacactgatagtgacatgagaccggagaagaacccacgattccgt
gagagcggtgactccgatgacgatggtgaagatgatcggaagagaagatcttaa

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