Arabidopsis thaliana (thale cress): AT5G44200
Help
Entry
AT5G44200 CDS
T00041
Symbol
CBP20
Name
(RefSeq) CAP-binding protein 20
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT5G44200 (CBP20)
09122 Translation
03013 Nucleocytoplasmic transport
AT5G44200 (CBP20)
03015 mRNA surveillance pathway
AT5G44200 (CBP20)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G44200 (CBP20)
03041 Spliceosome [BR:
ath03041
]
AT5G44200 (CBP20)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
AT5G44200 (CBP20)
Spliceosome [BR:
ath03041
]
Common components
Common spliceosomal components
Cap binding complex
AT5G44200 (CBP20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
DUF5721
Motif
Other DBs
NCBI-GeneID:
834443
NCBI-ProteinID:
NP_001078705
TAIR:
AT5G44200
UniProt:
Q9XFD1
LinkDB
All DBs
Position
5:complement(17801737..17804203)
Genome browser
AA seq
257 aa
AA seq
DB search
MASLFKEQAKLSAYRDRRFSGTQEEFDEALRASTTVYIGNVSFYTTEEQLYELFSRAGEI
KKIIMGLDKNTKTPCGFCFVLFYSREDTEDAVKYISGTILDDRPIRVDFDWGFQEGRQWG
RGRSGGQVRDEYRTDYDPARGGYGKLVQKELEAQRQLVDYGTGSLGAYPQAAPTNYGNGR
RGGGNYGQGGQNRHGRGDYHRKRQRDDDRYGRDNSRRNTDHESRRDTDSDMRPEKNPRFR
ESGDSDDDGEDDRKRRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttgttcaaggagcaagcaaagctatcagcttatcgtgatagaagattttca
ggaacacaagaggagtttgatgaagcgctaagagcatctacaacggtttacattggcaat
gtgtctttttacactactgaagaacagctttacgagcttttctctagagctggagaaatc
aaaaagatcatcatgggtttggataagaacactaaaacaccttgtggcttttgtttcgtc
ctgttctactctagagaggatactgaagatgcagtcaagtatataagtgggactattctc
gatgaccggcctattcgtgtggattttgattggggattccaagaaggaagacaatggggc
cgtggtagaagcggtggccaggttcgtgatgaataccgtacagattacgatcctgctaga
ggtggttatgggaaattagttcagaaggaactcgaagcacaaaggcagctcgtggattac
ggtactggctcattgggagcttatcctcaagctgcgccaacgaattatggaaatggaagg
cgtggtggtggaaactatggtcaaggaggacaaaatcgccatggaagaggagactaccat
cggaaacgacaaagagacgatgatcgctatggccgcgataactcaagaagaaacacagat
catgagtctaggagagacactgatagtgacatgagaccggagaagaacccacgattccgt
gagagcggtgactccgatgacgatggtgaagatgatcggaagagaagatcttaa
DBGET
integrated database retrieval system