Arabidopsis thaliana (thale cress): AT5G45250
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Entry
AT5G45250 CDS
T00041
Symbol
RPS4
Name
(RefSeq) Disease resistance protein (TIR-NBS-LRR class) family
KO
K16226
disease resistance protein RPS4
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
AT5G45250 (RPS4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIR
NB-ARC
TIR_2
C-JID
LRR_14
LRR_EndoS
LRR_R13L1-DRL21
LRR_8
LRR_4
LRR_3
WHD_ROQ1
AAA_16
LRR_RPS2
NACHT
AAA_22
AAA_14
ATPase_2
LRR_13
LRR_At1g61320_AtMIF1
AAA_18
AAA
DO-GTPase2
MMR_HSR1
nSTAND3
AAA_30
ABC_tran
Viral_helicase1
MeaB
Motif
Other DBs
NCBI-GeneID:
834561
NCBI-ProteinID:
NP_199338
TAIR:
AT5G45250
UniProt:
Q9XGM3
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(18321764..18326175)
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AA seq
1217 aa
AA seq
DB search
METSSISTVEDKPPQHQVFINFRGADLRRRFVSHLVTALKLNNINVFIDDYEDRGQPLDV
LLKRIEESKIVLAIFSGNYTESVWCVRELEKIKDCTDEGTLVAIPIFYKLEPSTVRDLKG
KFGDRFRSMAKGDERKKKWKEAFNLIPNIMGIIIDKKSVESEKVNEIVKAVKTALTGIPP
EGSHNAVVGALGNSNAGTSSGDKKHETFGNEQRLKDLEEKLDRDKYKGTRIIGVVGMPGI
GKTTLLKELYKTWQGKFSRHALIDQIRVKSKHLELDRLPQMLLGELSKLNHPHVDNLKDP
YSQLHERKVLVVLDDVSKREQIDALREILDWIKEGKEGSRVVIATSDMSLTNGLVDDTYM
VQNLNHRDSLQLFHYHAFIDDQANPQKKDFMKLSEGFVHYARGHPLALKVLGGELNKKSM
DHWNSKMKKLAQSPSPNIVSVFQVSYDELTTAQKDAFLDIACFRSQDKDYVESLLASSDL
GSAEAMSAVKSLTDKFLINTCDGRVEMHDLLYKFSREVDLKASNQDGSRQRRLWLHQHII
KGGIINVLQNKMKAANVRGIFLDLSEVEDETSLDRDHFINMGNLRYLKFYNSHCPQECKT
NNKINIPDKLKLPLKEVRCLHWLKFPLETLPNDFNPINLVDLKLPYSEMEQLWEGDKDTP
CLRWVDLNHSSKLCSLSGLSKAEKLQRLNLEGCTTLKAFPHDMKKMKMLAFLNLKGCTSL
ESLPEMNLISLKTLTLSGCSTFKEFPLISDNIETLYLDGTAISQLPMNMEKLQRLVVLNM
KDCKMLEEIPGRVGELKALQELILSDCLNLKIFPEIDISFLNILLLDGTAIEVMPQLPSV
QYLCLSRNAKISCLPVGISQLSQLKWLDLKYCTSLTSVPEFPPNLQCLDAHGCSSLKTVS
KPLARIMPTEQNHSTFIFTNCENLEQAAKEEITSYAQRKCQLLSYARKRYNGGLVSESLF
STCFPGCEVPSWFCHETVGSELEVKLLPHWHDKKLAGIALCAVVSCLDPQDQVSRLSVTC
TFKVKDEDKSWVAYTCPVGSWTRHGGGKDKIELDHVFIGYTSCPHTIKCHEEGNSDECNP
TEASLKFTVTGGTSENGKYKVLKCGLSLVYAKDKDKNSALETKYDMLIGKSFQETSEGVD
GRVKKTKGKYVMPVEKNFQETTEGVDGRVNKKKKTRMDNGRPKKKQRSGRDDNQTRMQVE
LQEGNINSVIMHTVKNF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggagacatcatctatttccactgtggaagacaagccaccgcagcatcaggtgttcatc
aatttccgtggggcagatttgcgccggagattcgtcagccatctcgtaacggccttgaaa
ttgaacaacatcaacgtctttatcgacgactatgaagacagaggtcaacctctagatgta
ctgctgaagaggatagaggagtccaaaatcgttttggctatcttctccggcaactacacc
gagtcagtctggtgcgtgagagagctggagaagatcaaagattgtacggatgaaggaaca
ctcgttgcgattccaatcttctacaagctggagccatccaccgttagagatttgaaagga
aagttcggtgatagatttaggagtatggctaagggtgatgagaggaaaaagaaatggaag
gaagcttttaacttgattcctaacattatgggcatcatcattgacaagaaaagtgtggag
agtgagaaagtcaatgaaattgtgaaggcggtgaagacagcgttgaccggaataccaccg
gagggaagtcacaacgccgtcgtgggtgctttaggtaatagcaacgctggaacttcctca
ggagacaaaaagcatgagacttttggaaacgaacaacggttaaaagatttggaagagaag
ttggatcgtgataaatacaagggaactcgtatcattggagttgttgggatgcccggaatt
ggtaaaaccacactcctgaaagagctatataagacgtggcagggcaagttttcgaggcat
gcgctaatcgatcaaatccgtgtaaagtccaagcacttggagttggatcgcttgcctcaa
atgctcttaggcgagttgtccaagttaaaccatcctcacgtagacaatctcaaagatcca
tacagtcaactgcatgaacgcaaagtgcttgttgtacttgatgatgttagtaaaagggaa
caaatagatgctcttcgtgagatactagactggattaaggagggtaaggagggaagcagg
gttgtcattgcaacaagcgacatgtccttaacaaatggtttggttgatgatacttacatg
gttcaaaatttgaaccacagagatagcttacaactatttcactatcatgcctttattgat
gatcaagccaatcctcaaaagaaagatttcatgaagctgtcagaagggtttgtacattac
gccagaggccatccactagccctcaaagtattgggtggagagcttaataagaaaagtatg
gatcattggaattcgaaaatgaagaaacttgcacagagccccagccctaatattgtcagt
gtcttccaagtgagttatgatgaattgactacagcgcagaaagatgcatttctcgacata
gcctgtttcagatcacaggacaaggattatgtagaaagtctactggcttcatctgacctt
ggttcggctgaagcaatgagtgcagtcaaatctctcacggataagttcctgattaatact
tgtgatggccgagtggagatgcatgatctattatataaattttcaagggaagttgatctg
aaggcatctaatcaggatggtagcagacaacggaggctgtggctccatcaacacataatc
aagggaggcataatcaatgtattgcaaaataaaatgaaagctgccaatgttagaggtatt
ttcctagacttgtctgaagtggaagacgaaacgagcttagaccgcgaccacttcataaat
atgggaaatctccggtatctcaagttctacaattcccattgtccacaggaatgtaaaacc
aacaataaaatcaacatccctgataaacttaagctaccattgaaagaagttcgatgcctc
cactggctgaaattcccattggagacacttccaaacgatttcaacccaattaatcttgtc
gaccttaagctgccctacagtgaaatggaacaactttgggagggtgacaaggacacacca
tgcttaaggtgggtcgatctcaatcactcaagtaagttgtgcagcttgtcagggttatca
aaagctgaaaagcttcaaaggttgaaccttgaaggttgcacaacactgaaagcgtttcca
catgatatgaaaaaaatgaaaatgcttgctttcttgaatctgaaggggtgtacaagtctc
gaatctcttccagagatgaatttgatttctctgaaaacacttactctcagcggctgctca
acttttaaggaatttccgttgatttcagataatatagaaactctatacttagatggcaca
gcaataagtcagcttcctatgaacatggagaagcttcagagacttgttgtattgaatatg
aaagactgcaaaatgctagaggaaattccaggccgtgttggtgagctgaaagctcttcaa
gaactgatactctctgattgtttaaatctcaagattttcccagaaatcgacattagcttt
ttaaacattttacttttggatgggacagccattgaagtgatgccacaattaccctcagtg
cagtatttgtgcttaagcagaaatgctaagatcagctgccttcctgttggaatcagtcag
ctttctcaacttaaatggctggacctgaagtattgtacgagtcttacatcagttccagag
tttccaccaaatcttcagtgcttagatgcacacggctgtagttcgctgaagacagtttca
aagcctttggcccgtatcatgccaactgaacagaatcattccacattcattttcaccaac
tgtgagaacctggaacaagctgcaaaggaggaaatcacatcgtatgctcaaaggaaatgc
cagctgttatcatatgctcggaaacgctacaatgggggtcttgtttcagaatctttgttc
agcacttgctttcctggatgtgaagtgccttcttggttttgtcatgaaacagttggatct
gagttagaagtaaaactcctcccacattggcatgacaagaagcttgccgggattgctcta
tgtgctgtagtctcatgtcttgacccccaagatcaagtcagccgcttgtcagtgacctgc
acctttaaagtaaaagatgaagacaagtcttgggtcgcatatacttgtccagtaggaagt
tggaccagacatggaggcgggaaagataagattgagctagaccatgtcttcattggatac
accagttgcccacatactataaaatgtcatgaagaaggtaactcagatgaatgcaatcct
accgaagcctctcttaaatttactgtgacaggaggtacaagtgagaatggaaaatacaag
gtgttgaagtgtggtttaagtttggtgtatgctaaggataaagacaaaaatagtgctctt
gaaacaaagtacgatatgcttattggaaagagctttcaagaaacttcagaaggggttgat
ggaagggtaaagaaaacgaaaggaaagtacgttatgcctgttgaaaagaactttcaagaa
actacagaaggggttgatggaagagtaaataaaaagaaaaaaacaagaatggataatgga
cggccaaagaagaagcagagatcaggaagagatgataatcaaactaggatgcaagtggaa
ctccaagaaggaaatataaattcagtgatcatgcacacggttaagaatttctga
DBGET
integrated database retrieval system
