KEGG   Arabidopsis thaliana (thale cress): AT5G45330
Entry
AT5G45330         CDS       T00041                                 
Symbol
DCP5-L
Name
(RefSeq) decapping 5-like protein
  KO
K18749  protein LSM14
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G45330 (DCP5-L)
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     AT5G45330 (DCP5-L)
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 834569
NCBI-ProteinID: NP_199346
TAIR: AT5G45330
UniProt: Q9FH77
LinkDB
Position
5:complement(18363406..18366684)
AA seq 571 aa
MASESSQSSSPSSSQPPSSVPSPSPGNNVGDTFIGSFISLISKYEIRYEGILYHLNVQDS
TLGLKNVRSCGTEGRKKDGPQIPPCDKVYDYILFRGSDIKDLQVNPSPSAQSRQEIQSEQ
DVNQSPHSRPAMTMSSPISGYDSGYGLGRGSQWINTPALSSKPVPVTQHSSVPLSFQPPS
ANAGSLTESPVSLIDSTQSNAGSSMPIPSFVQGNKFASSGVPLGMMQKPVSSSSTIPNGP
QIIDYFSSPIMGLVDDSSQVVTRSPDVSSNQSYSSNPSPLGQTQLHTPPGLASVSSNLSP
PSEAQLSAPNIQKIYPSAPQAIGKVVYDPQSNHPHRSIPHELPAVASNSAPVIPGPLSKS
PESFFDMDPSLQSRQQMVYRGQEMFAATNPASANVPSQSFAPRNHAPLLPLPVSAHQSRI
PSSSIEYTEEFDFEAMNEKFKKSELWGYLGRNNQRNQNDYGEETAIEPNAEGKPAYNKDD
FFDTISCNQLDRVARSGQQHNQFPEHMRQVPEAFGNNFQRPPPLQPGQGAYLAAQTNYRG
GYHNNNNNNYYSNSGYGYYSGGRGRGRNTHF
NT seq 1716 nt   +upstreamnt  +downstreamnt
atggcgagtgagagttcgcaatcttcctcgccgtcgtcatctcaacctccgtcatctgta
ccttctccgtcgccgggtaacaacgtcggcgatacgtttataggaagtttcatcagtcta
atttctaagtacgagatccgttacgaaggcattctctaccatctcaacgttcaggactcg
acgctaggtctaaaaaacgtaagatcatgtggaacggaggggaggaagaaagatgggccg
caaattccgccatgtgataaagtttacgattacattctttttcgtggaagtgacatcaag
gatctccaagttaacccatctccatctgctcaatcaagacaagagattcaaagtgaacaa
gacgtcaatcagtcccctcactctaggccagctatgactatgagctctccgatttctggc
tatgatagcggttatggtttggggagaggatcacaatggatcaatacacctgctttgagt
agtaaaccggttcctgtcacacaacattcatcagtccctttaagcttccagcctccttca
gctaatgctggaagtttgacagaatcaccagtgagcttaattgattcaactcaaagtaat
gctggttcctcgatgcccattccttcttttgtgcaaggtaacaaatttgcttccagtggt
gtccctcttggtatgatgcagaagccagtttcatcctcctcgaccatacccaatggtccg
cagattattgattatttttcttcaccaatcatggggttagtggatgattcatcacaggtt
gttactcgttcacctgacgtctcttccaatcaatcatactcttccaacccttctcctctt
ggtcaaacacaactccatactccacctggccttgcttcagtatcctctaacctttctcca
ccttctgaagcgcagctttctgctccaaatattcagaaaatttaccccagtgcaccccag
gctattggtaaagttgtctatgaccctcagtctaatcatcctcaccgatctatacctcat
gagttacctgctgtggcttctaattcagctcctgtgattcctggtccattgtcaaaatcg
cctgagtcatttttcgatatggatccgtcactgcaatctaggcagcagatggtatatagg
ggtcaagagatgtttgctgcaactaacccggcatcagcgaatgtgccatcacaaagtttt
gctcccagaaatcatgcaccattgctgcctcttccagtttcagctcatcagtctcggatc
cctagttctagcattgagtacactgaagaatttgattttgaagcaatgaatgagaagttc
aagaagagtgaactatggggttatcttggaagaaataaccagaggaatcaaaatgattat
ggggaagaaactgcgattgagccaaacgcagaagggaagcctgcatataacaaggatgac
ttttttgacacaatctcgtgcaatcaacttgaccgtgtggcaagaagcggacaacagcac
aaccagtttcccgaacacatgagacaagttcctgaggcatttggtaataattttcaaagg
ccacctccactacaaccaggtcagggtgcatatctcgctgcacaaaccaattacagaggc
ggataccataataacaacaacaacaactactactcaaactcgggttatggttactactct
ggtgggagaggccgaggcagaaacacacatttctga

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