KEGG   Arabidopsis thaliana (thale cress): AT5G46250
Entry
AT5G46250         CDS       T00041                                 
Symbol
LARP6a
Name
(RefSeq) RNA-binding protein
  KO
K15191  La-related protein 7
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT5G46250 (LARP6a)
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    7SK RNP complex
     AT5G46250 (LARP6a)
SSDB
Motif
Pfam: La RRM_1 Hen1_LCD RBD_AKAP-17A PHM7_cyt RRM_ACIN1
Other DBs
NCBI-GeneID: 834667
NCBI-ProteinID: NP_851141
TAIR: AT5G46250
UniProt: Q94A38
LinkDB
Position
5:18755280..18758333
AA seq 422 aa
MSSLPLRSGEKMESPSISDAVPLHAPEDATADFSQPQSPLHEVDSFPVTESSDDVVVNVS
EIPNLSPSDDDFDHERNSGEDRDQDHGENPVETDGVVVPIDELNQKIIRQVEYYFSDENL
PTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR
LSPLPEIRDPKIFTVLVENLPEDHSNENIREIFGKAGSIKSVSICDPNAVEESEKGGKKE
NFIRTRLHAFVEYETVEAAEKAAATLNNEQDWRNGLRVKLLEQAAGKFAQRRPARREVDK
EKDTTGRVHDQTGGEKNKKTREHQNHRLHHSDNPADDDGGNHQKDKNGNKGRVVGQGRRQ
NHQGGNGIGHGTASSSSHPNYHPVEVSKRPPGPRMPDGTRGFTMGRGKAIPPPTSTQTSH
EV
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgtcttctcttcctcttcgctccggtgagaagatggaatcgccttccatctccgacgcc
gttccacttcacgcaccagaagacgcgaccgcggatttttcccaaccgcaatcgccgtta
catgaagttgattcgtttccagttactgaatcctccgatgatgttgttgttaacgtctcg
gagataccgaatttatctccgtctgatgatgattttgaccacgagcgaaatagcggcgag
gatcgcgatcaggatcacggcgagaatccggttgagaccgatggtgttgttgttccaatc
gatgagttgaatcagaagatcattagacaggttgaatactactttagtgacgagaatttg
cctactgacaaatttcttctgaatgcaatgaagagaaacaaaaaaggctttgttcctatt
tctaccattgctacgttccacaaaatgaagaagcttactcgagatcatgctttgatagta
tcagccttaaaggagtcatcgtttcttgttgttagcgctgatgagaagaaggtgaagcgg
ctgagtcctcttcctgagatcagagatccaaagattttcactgttttggtagaaaatttg
ccagaggatcattcaaatgagaatattcgagagatatttggtaaagctggaagtattaaa
agtgtatccatatgtgatccaaatgctgttgaagaatcagagaagggtgggaagaaggaa
aatttcatcagaaccagattacatgcctttgtggagtatgaaacggtggaggcagctgaa
aaagcggcagctacattgaataatgagcaagactggagaaatgggttgcgagttaagctt
cttgaacaagcagcaggaaagtttgcacagagaagaccagctcggagggaagtcgataaa
gaaaaggacactacaggcagagttcatgatcaaactggaggagagaaaaacaaaaagacg
cgtgaacatcaaaatcaccgtctccatcattctgataatcctgctgatgatgacggtggc
aatcatcagaaggataaaaatggaaacaaaggcagagttgtaggacaaggaagacgacag
aatcatcaaggcggcaacggcattggacatggaacagcttcatcatcttctcatcctaat
tatcatcctgttgaggtctcaaagcgtccacctggcccgagaatgcctgatgggacgaga
gggttcacaatggggcgtggtaaagcgattcctcctcccacatctactcaaaccagtcat
gaagtttga

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