Arabidopsis thaliana (thale cress): AT5G47210
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Entry
AT5G47210 CDS
T00041
Name
(RefSeq) Hyaluronan / mRNA binding family
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G47210
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
AT5G47210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
GEMI5_RBS
TcdA_TcdB
Motif
Other DBs
NCBI-GeneID:
834767
NCBI-ProteinID:
NP_199532
TAIR:
AT5G47210
UniProt:
Q9LVT8
A0A178UQN5
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All DBs
Position
5:complement(19168941..19171263)
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AA seq
357 aa
AA seq
DB search
MASLNPFDLLGDDAEDPSQLAVALSQKVEKAAAAVQPPKAAKFPTKPAPPSQAVRESRNA
PQGGRGGTGGRGGFSRGRGNGGYNRDNRNNDAPGNENGFSGGYRRPSEDADGASRGGSVG
GYRVGGGREGPRRGGVANGESGDVERPPRNYDRHSRTGHGTGMKRNGGGRGNWGTTEDDI
PPTSEEPTTEVEKSPVAEKQGGEDETPEAKKELTAEEKAQKEAEEAEAREMTLEEYEKIL
EEKKKALQATKVEERKVDTKVFESMQQLSNKKNTDEEIFIKLGSDKEKRKDATEKAKKSL
SINEFLKPADGKRYNGRGGGSRGRGGRGGRGEGGNQRYAKEAAAPAIGDTAQFPSLG
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctttgaaccctttcgatcttctaggagatgatgctgaggatccaagccagctc
gctgtggctttgtctcagaaagtcgagaaagctgctgctgctgttcagcctcctaaggcc
gctaagttcccaaccaagccggctcctccttctcaagcagtgagggagtcgaggaatgct
cctcaaggaggtcgtggtgggactggtggacgtggtggattttcccgtggcaggggtaat
ggtggatacaaccgggacaacaggaacaatgatgctcctggaaatgagaatggattttct
ggaggatacaggagaccttctgaagatgctgatggagcaagccgtggtgggtctgttggt
ggataccgtgttggcggtggtcgtgaaggacctcgccgtggtggagttgccaacggggaa
tctggtgatgttgaacgcccaccgaggaattatgaccgccatagcaggacaggtcatggt
actggcatgaaacgtaatggtggaggtcgtggaaactggggcactactgaagatgatatc
cctccaacgtctgaggaacctaccacagaggttgagaagagccctgttgctgagaagcaa
ggaggtgaggatgaaacccctgaagcaaagaaagaactcactgcggaagagaaagcacag
aaagaagctgaagaagctgaagccagggagatgactctagaagagtatgagaaaattctg
gaggagaagaagaaggctctgcaagccacaaaggttgaggaaaggaaagttgacaccaaa
gtgtttgagtccatgcaacagctctctaacaagaagaacaccgatgaagaaatcttcatc
aagctgggatctgacaaggaaaaacgcaaagatgctactgagaaggccaaaaagtcgttg
agcattaatgagttcttgaagccggctgatggaaagaggtacaacgggagaggtggaggc
tcccgcggaagaggaggtcgcggtggtcgtggtgaaggaggaaaccaaaggtatgcaaaa
gaagctgcagctccggcgattggagacacagctcagttcccttcgttgggctag
DBGET
integrated database retrieval system
