Arabidopsis thaliana (thale cress): AT5G47430
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Entry
AT5G47430 CDS
T00041
Name
(RefSeq) DWNN domain, a CCHC-type zinc finger
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G47430
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G47430
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
U-box type E3
AT5G47430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
834790
NCBI-ProteinID:
NP_199554
TAIR:
AT5G47430
UniProt:
B9DFV2
LinkDB
All DBs
Position
5:complement(19235555..19241263)
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AA seq
892 aa
AA seq
DB search
MAIYYKFKSARDYDTIAMDGPFISVGILKDKIFETKHLGTGKDLDIVVSNAQTNEEYLDE
AMLIPKNTSVLIRRVPGRPRITVITTQEPRIQNKVEDVQAETTNFPVADPSAAEFPEDEY
DEFGTDLYSIPDTQDAQHIIPRPHLATADDKVDEESKIQALIDTPALDWQQRQGQDTFGA
GRGYGRGMPGRMNGRGFGMERKTPPPGYVCHRCNIPGHFIQHCPTNGDPNYDVKRVKPPT
GIPKSMLMATPDGSYSLPSGAVAVLKPNEDAFEKEMEGLPSTTRSVGELPPELKCPLCKE
VMKDAALTSKCCYKSFCDKCIRDHIISKSMCVCGRSDVLADDLLPNKTLRDTINRILEAG
NDSTENVGSVGHIPDLESARCPPPKALSPTTSVASKGEKKPVLSNNNDASTLKAPMEVAE
ITSAPRASAEVNVEKPVDACESTQGSVIVKEATVSKLNTQAPKEEMQQQVAAGEPGKKKK
KKPRVPGNDMQWNPVPDLAGPDYMMQMGPGPQYFNGMQPGFNGVQPGFNGVQPGFNGFHP
GFNGFGGPFPGAMPPFMGYGLNPMDMGFGGGMNMMHPDPFMAQGFGFPNIPPPHRDLAEM
GNRMNLQRAMMGRDEAEARNAEMLRKRENERRPEGGKMFRDGENSRMMMNNGTSASASSI
NPNKSRQAPPPPIHDYDRRRRPEKRLSPEHPPTRKNISPSRDSKRKSERYPDERDRQRDR
ERSRHQDVDREHDRTRDRRDEDRSRDHRHHRGETERSQHHHRKRSEPPSSEPPVPATKAE
IENNLKSSVFARISFPEEETSSGKRRKVPSSSSTSVTDPSASASAAAAVGTSVHRHSSRK
EIEVADYESSDEDRHFKRKPSRYARSPPVVVSDVSEDKLRYSKRGKGERSRA
NT seq
2679 nt
NT seq
+upstream
nt +downstream
nt
atggcaatttattacaagtttaagagtgcaagggattatgataccattgccatggatggt
ccttttatatccgtcggtattctcaaagacaaaattttcgaaactaagcatttgggcact
ggtaaagaccttgatattgtcgtctccaatgcccaaactaacgaagagtatctggatgaa
gcaatgttaatcccaaagaatacatctgtccttattcgtcgggttcctggacgtcctcgc
atcacagttattaccacacaagagcctagaatccagaataaagtggaagacgttcaggct
gaaaccaccaattttcctgttgctgatccatctgctgctgaatttcctgaagatgagtat
gacgagtttgggactgatctttattccattcctgatacccaagatgcccagcatattatt
ccacgtcctcatcttgcaaccgcagacgacaaagtagatgaagaaagcaaaattcaggcg
ctgattgacactccagcacttgactggcaacaacgacaaggtcaagatacttttggagct
ggtagaggttatgggaggggtatgcctggaaggatgaatggacgtggttttggaatggaa
aggaaaacgccacctccaggttatgtgtgccatcgttgcaatatccctggacattttatt
cagcattgccccacaaatggagaccctaactatgatgttaagagagttaagccacctact
ggtatccccaagtccatgttgatggcgaccccagatggttcttattccttgccaagtggc
gcagttgcagttctgaaaccaaatgaggatgcttttgagaaggaaatggagggattgcca
tcaacaacacgttctgtaggagaacttccacctgagctaaaatgcccattatgcaaagaa
gtgatgaaagatgctgcgcttacaagcaaatgttgttacaagagcttctgtgacaagtgt
atcagagatcacattatttcaaagtcaatgtgtgtttgtggaagatcagatgtacttgct
gacgaccttctaccaaacaagaccctcagggataccataaaccgtattttggaagctgga
aacgatagcactgagaatgtgggcagcgttggccatatcccagatttggagtctgcacgc
tgtccacctcccaaggctctatctcctactacatctgttgcatctaaaggcgagaagaaa
ccagtacttagtaacaataatgatgcttcaactttaaaggcgccaatggaagttgcagag
atcacaagtgcccctcgtgcatctgcagaagtgaatgtagaaaagccagttgatgcatgt
gaaagcactcaagggtccgtgattgtgaaagaagcaacagtgtcaaagttgaatacgcaa
gcccccaaggaagaaatgcagcagcaggttgctgctggagagccaggaaaaaagaagaaa
aagaaaccaagagtgcctgggaatgacatgcaatggaatcctgtgccagatctagcaggc
cctgactatatgatgcaaatgggaccaggtccgcagtacttcaacggcatgcaacctggc
ttcaatggcgtacaaccaggcttcaacggtgttcaacctggcttcaatggctttcaccct
ggcttcaatggatttggaggcccgtttccaggcgcaatgcctccatttatgggttacgga
ttaaacccaatggacatgggatttggtgggggtatgaatatgatgcatccagatccattc
atggcacaaggatttgggttccctaatataccaccaccccatagggacctagctgaaatg
ggaaaccgaatgaatctccaacgtgctatgatgggcagagatgaagccgaagcccgaaac
gctgagatgttaagaaaacgtgaaaacgagagacgacctgaaggtgggaagatgtttagg
gatggagagaatagcagaatgatgatgaacaacggtacttcagcctctgcatcatccatc
aaccctaataaatctagacaagcacctccaccaccaatccacgattacgatcgccggaga
cgaccggagaagagactatccccagagcatccgcctacgcgtaaaaacatttccccgtct
cgcgactccaagagaaaatccgagcgttatcctgatgaacgagatcggcaacgcgaccgt
gagaggtcacgtcaccaagacgtagatcgtgaacacgaccgtactcgcgaccgtcgcgat
gaagacagaagccgagatcatcgccaccaccgtggtgaaaccgaacgcagccaacatcac
caccgcaagagatcggaaccgccttcatcggagccaccagtccctgctactaaagcagag
atcgagaataatcttaagtctagcgtattcgctcggataagttttccggaggaagaaaca
tcttctggtaaacgaagaaaggtgccttcctcttcttctacttctgttacggatccatct
gcttccgcctctgccgcagccgccgtgggaacatcagttcaccgacacagtagtcggaag
gaaatagaagtagcagattatgaatctagtgatgaagataggcatttcaagaggaagccg
tcaaggtacgcgcgatcaccaccggtggtggttagtgatgtgagtgaagataaactccga
tactcaaaacgtggaaagggggagagatctcgagcttga
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