KEGG   Arabidopsis thaliana (thale cress): AT5G47480
Entry
AT5G47480         CDS       T00041                                 
Name
(RefSeq) RGPR-like protein
  KO
K20353  COPII coat assembly protein SEC16
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G47480
Membrane trafficking [BR:ath04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    AT5G47480
SSDB
Motif
Pfam: TPR_Sec16 Sec16
Other DBs
NCBI-GeneID: 834798
NCBI-ProteinID: NP_199559
TAIR: AT5G47480
UniProt: Q9FGK9
LinkDB
Position
5:19257027..19263425
AA seq 1350 aa
MASTADFLLDDQTDEDFFDKLVDDSYTPTASSSAKELKFDDGSDSDDAKAFANLSVVDDV
LGDGDVALNEAGLGNDVANEGTSGSVGKEEPSSSIAPEAVQFVNSDANRLRDVDVVRSEV
DDMALTETGKESNIVDGSGSPGVKEVDWGSFYADSSVNDGGGFGSYSDFFTELDATAGNV
QGQAEVAVATGGNLVANDTINTSVGLDNSAGFEQHQGQVQHDSGSGQYVDNSQSWENLYP
GWKYDASTGQWYQVDGQDATVNSQESYINSTGNWESVAADNSDVAYLKQSTTSAMAGTAE
SVSTWNQVSQVGNGYPEHMVFDAQYPGWYYDTIAQEWRSLDSYNQASQTTVTGQAHDQQV
QNGHARTTTYHNNSQSSVYDVNNKNQTFKAQDFAIQGQHGSWDESYYANNQQAGNTWQPV
NVGKAEPAVTSDSLSRFGGNQQVNNLYSTESVAEQFKPNTIGAQSFIPQHMNVASATQNG
PLSFSNDLYNRQQSVDHAQKSFQNNQLFSPSVGRSSDRRPPHALVSFGFGGKLIVMKDNN
GSLQNTSFGSQGIGGSSITVLNLAEVISGSASYSSPGEDSLSYFRCLHQQSLPGPLVGGN
VGSKELHKWIDERLLHCESSNMDFSRGKLLKMLLSLLRISCQYYGKLRSPFGSDASQKET
DTPEAAVAKLFAFAKKDGIQNGYAPISQCLQHLPPESQMQVTASEVQNLLASGRKMEALQ
CAQEGHLWGPALVIAAQLGDQFYVDTVKQMALRQLIPGSPLRTLCLLVAGQPAEVCPTGS
SSSMLDNWEENLGIITANRTTDDDLVIIHLGDSMWKERGEIIAAHICYLIADKNFDPYSE
SARLCLVGADHWKCPRTYASPDAIQRTELYEYSKTLGNSQYILLPFQPYKIIYAHMLAEV
GKLSTAQKYCQAVIRCLKTSRSSEVEMWKQFASSLEERIRSHQEGGNLAPAKLVGKLLNS
LWGMPPPAPHSTTGNPQVNEYQHQQQEAAKLSYSQSANTMSSLMPPASIEPVHEWGGNGR
TMAAHSRSVSEPDFSRTPIQDQTDSSKDKAPDGVTQVKSTRKVPSSRFSRFGIGILKNTV
GKVFPSRSSNEAKLGNENQFYYDDNLKRWVERGVEPPAEEAALPPPPTSVPFRSNSLGHE
NKSEIKNEMSPSSGSWSSGSPTPSENSPGIPPVSQGSNQFSARGRMGVRARYVDTYNQGS
SSMYQSPPVQSSKPPIPAKAKFFVPAAPASFANDQVMESVSAETRQENSGDEAVVGSAGA
PGPSQASFQSPTPSPIAMQRFPSVDNIRRSGSGTSLNGDLPQSVSRRTASWSGSVNSSSF
MSPTSASTFRPSPLNSSSSSLGEELQEVEL
NT seq 4053 nt   +upstreamnt  +downstreamnt
atggcttcgactgctgatttcctcctggatgatcaaacggacgaggatttcttcgacaaa
cttgttgatgattcctatactcctaccgcttcatcctctgccaaggagctgaaattcgat
gacggtagtgattccgatgacgccaaagcttttgctaatctctccgtcgttgacgatgtt
ttgggtgatggagatgtcgcattgaatgaagcaggtttggggaacgatgttgcaaacgag
ggtacaagtggttcggtgggaaaagaagagccttcttcatctattgctccggaagctgtt
caatttgtcaacagtgatgcaaataggttaagggatgttgatgtggtgcgatcggaggtg
gatgatatggcactaactgaaacaggaaaagagagtaatatagtcgatggatctgggagt
cctggggttaaggaggttgactggggctcgttttatgcagattcatctgtaaatgacggt
ggtgggtttggttcatactctgatttcttcactgagttggatgcaactgcaggaaatgta
cagggacaggcggaggtagctgtggccactggaggaaacttagtagccaatgatacaatt
aacacaagtgttggtttagataattcggcaggctttgagcaacaccagggtcaagtgcaa
cacgattctggaagcgggcagtatgtggataacagtcaatcttgggaaaatctctatcct
ggatggaaatatgatgcaagtactggtcaatggtatcaagttgatggtcaggatgcaacc
gttaattcacaggagagctatattaactcaacaggtaactgggaaagcgttgctgctgat
aactcggatgttgcttatctgaaacagagtacaacatctgcaatggctggcacagctgag
agtgtgtctacatggaaccaggtttcacaagtgggcaatggatatccagaacacatggta
tttgacgcccagtatcctggatggtactatgacacaattgctcaagaatggcgctctctg
gacagctacaaccaggcttcccaaacaactgtaactggtcaagctcatgatcagcaagtt
cagaacggtcatgctcgtacaactacgtatcacaataatagccagagtagtgtgtatgat
gttaacaacaaaaaccagacattcaaagcgcaagactttgctattcagggccaacacgga
agttgggacgaatcttactatgccaacaatcagcaggctggaaacacttggcaaccagta
aatgtaggtaaggctgagcctgcggtaacttctgattcattatcacgcttcggaggaaac
cagcaagtaaataatttgtacagtacagaatctgtggctgaacagtttaagccaaatacg
attggagcccagagctttatccctcagcatatgaatgtggctagtgccacacaaaatgga
ccattgagtttctcaaacgatttgtataatagacagcaatcggtagatcatgctcaaaag
tcttttcagaacaatcagcttttctccccaagtgtgggaagatcatctgataggcgtcca
ccacacgcactagtcagttttggatttggtgggaagctcattgttatgaaggataataat
ggttctctgcagaatacatcatttgggagtcaggggattgggggaagctccatcactgtc
ttaaacttggcagaagttatttctgggagtgcctcttattccagtcccggggaagactct
ttgagctactttcgttgtctgcatcaacaatctcttccaggccctttggtagggggaaat
gttggaagtaaagagttgcataagtggattgatgagagactcttgcattgtgaatcttcc
aacatggatttttcaagagggaaactcttaaagatgcttctttctttgctcagaatatct
tgtcagtattatgggaaactccgatctccttttggctctgatgcatcgcaaaaggaaacg
gatactccagaagcagcagttgctaaactttttgcatttgccaagaaagatggcatccaa
aatggttatgctcctattagccaatgcttgcagcatttaccacctgaatcgcaaatgcaa
gtaactgcttcagaggttcagaatcttctggcttctggtagaaaaatggaggctctacaa
tgtgcgcaagaaggccatttatggggaccggcacttgtcatcgcggctcaacttggggat
cagttctatgtagacactgtgaaacaaatggcccttcgccagctgatacccgggtcacct
ttacggacattgtgcctactcgttgcgggacaaccagctgaagtgtgtcccactggaagt
agtagtagcatgcttgacaattgggaagagaatttgggtataataactgctaacagaacc
acagatgacgaccttgtgattattcatcttggagatagcatgtggaaagaaagaggggag
ataattgcggcgcatatttgctatttaatcgcagacaagaactttgatccatactcagaa
agcgccagactctgccttgtcggagcggaccattggaaatgtcctcgaacatacgcaagt
ccagatgctatacagagaacagagttatatgaatactctaagacgctgggaaactctcag
tatatcctgttaccgtttcaaccatataaaatcatatatgctcatatgctggctgaagtt
ggtaaactttctactgcacaaaagtactgtcaagcagtaataagatgcctcaagactagc
cgatcatctgaagtagaaatgtggaagcagtttgcttcatctcttgaagagagaatccgt
agccatcaagagggtgggaatttggccccagcaaaacttgttggaaagctgctgaactct
ttgtgggggatgccaccacctgcaccacattcaacaactggaaacccgcaggtaaatgag
tatcaacatcaacagcaggaagcggctaagttatcatatagtcaatccgctaatacaatg
tcatcattgatgccacctgcttcaattgaacccgtacatgagtggggtgggaacgggagg
acaatggcagcacattctagaagtgtatcagagccagatttcagtaggacgccaatacag
gatcagactgactcctcaaaagacaaagctcctgatggggtgacacaggtgaaatcaact
cggaaggtgccaagttctcggtttagccgctttggtattggcatattgaagaacactgta
gggaaggtcttcccatctcgatcatctaatgaggcaaaactgggtaatgagaatcaattc
tactatgacgataacctaaagagatgggtggaaagaggtgtggaacccccagctgaggaa
gctgcactacctcctcctccaacgtcagtcccattccgaagcaactcattgggtcatgaa
aacaagtctgagataaagaacgagatgtctccatctagtgggagctggagtagtggcagc
ccaactccgtcagagaattctccgggaatcccaccagtctcacagggctcaaaccaattc
tcagctcgtggacgtatgggtgtgcgtgcaaggtacgttgacacctataatcaaggctcc
tcgagcatgtatcagtcacctcccgtgcaatcttctaaaccaccgattcctgcgaaagca
aaattctttgtcccagcagcaccggcatcgtttgcaaacgaccaggtaatggaatcggtt
agtgctgaaaccagacaagagaactcaggagatgaagcagtagtaggctctgcaggcgct
ccaggaccaagccaggcttcattccagtccccgacaccatctccaattgcaatgcagaga
tttccaagtgtagacaacatcagaagaagtggatcaggaacaagccttaatggtgatctt
cctcagtcagtatcaagaagaacagcttcatggagcggaagcgtcaacagctcgtcgttt
atgtctccaacgagtgcatcaacattcagaccaagcccactgaacagtagcagtagcagc
ttaggagaggagcttcaggaagttgaactgtaa

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