Arabidopsis thaliana (thale cress): AT5G47880
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Entry
AT5G47880 CDS
T00041
Symbol
ERF1-1
Name
(RefSeq) eukaryotic release factor 1-1
KO
K03265
peptide chain release factor subunit 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT5G47880 (ERF1-1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G47880 (ERF1-1)
03012 Translation factors [BR:
ath03012
]
AT5G47880 (ERF1-1)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
AT5G47880 (ERF1-1)
Translation factors [BR:
ath03012
]
Eukaryotic type
Release factors
AT5G47880 (ERF1-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
834839
NCBI-ProteinID:
NP_199599
TAIR:
AT5G47880
UniProt:
Q39097
A0A178UFY7
LinkDB
All DBs
Position
5:complement(19386045..19388587)
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AA seq
436 aa
AA seq
DB search
MGDKNDDDKNIEIWKIKKLIKSLEAARGNGTSMISLIMPPRDQVSRVTKMLGDEYGTASN
IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVNEDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQYYINPATSQPNVSGLILAGSADFKTELSQS
DMFDPRLAAKILNVVDVSYGGENGFNQAIELSAEILANVKFIQEKRLIGKYFEEISQDTG
KYVFGVEDTLNALESGAIETLIVWENLDINRYVMKNSATGETVIKHLNKEQEANTENFKV
ADSDLALDVEEKLSLLEWLANEYRRFGCALEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
TAFDSEDGEALDDDSE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaaaaacgatgacgacaagaacattgagatatggaagattaagaagctgatc
aaatcacttgaagctgctaggggtaatggaaccagcatgatctcactcatcatgcctccg
cgtgatcaggtctctcgtgttaccaagatgttgggtgatgagtatggaaccgcgtcaaac
atcaagagcagagtcaatcgtcaatctgttttgggggccataacttctgctcagcaaagg
ttgaaactttacaacagggtccctcctaatggtcttgtactctatactggaaccattgtt
aatgaggatggtaaggagaagaaggttactattgactttgagcctttcagacccatcaat
gcttctctctacctttgtgacaacaagtttcacacggaagctttgaatgaattgttggag
tctgatgacaagtttggtttcattgtaatggatggaaacgggactctctttggaactctt
agtggtaacacccgtgaggtacttcacaagttctctgttgatcttccgaagaaacacgga
agaggaggacagtctgctcttcgttttgcccgtctccgtatggagaagcgtcacaattat
gttaggaagactgctgagctcgccacacagtactacatcaatcctgctacaagtcagcct
aatgtgtctggactgattcttgctggttcagcagatttcaagactgagttgagtcagtct
gatatgtttgatccccgactggctgcgaagatactgaatgtggtggatgtatcatatgga
ggagaaaatggttttaatcaagctattgagctgtcagctgaaatccttgcgaatgtgaag
tttatccaagagaagcgtctgattgggaagtactttgaggagataagccaggacacgggg
aagtatgtgtttggtgtggaagatacgttgaacgctttggagtctggtgctattgagaca
ctgattgtatgggaaaatctcgatatcaacagatatgtgatgaagaacagtgcgactggt
gaaactgtgatcaaacacctgaacaaggaacaagaagccaacactgagaacttcaaagta
gccgacagtgacttggctttggacgtggaggagaagctgtcgttactggagtggcttgcc
aatgagtacaggcgttttggttgtgcgttagagtttgtgaccaacaagtcacaggaaggt
tctcagttttgcagagggtttggaggaatcggaggaatacttcgttaccagcttgacatg
actgcctttgattccgaggatggagaagctcttgatgatgattcggaatga
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