Arabidopsis thaliana (thale cress): AT5G48600
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Entry
AT5G48600 CDS
T00041
Symbol
SMC3
Name
(RefSeq) structural maintenance of chromosome 3
KO
K06675
structural maintenance of chromosome 4
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ath03036
]
AT5G48600 (SMC3)
Chromosome and associated proteins [BR:
ath03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
AT5G48600 (SMC3)
Condensin II
AT5G48600 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
AAA_15
Ubiq_cyt_C_chap
HIP1_clath_bdg
FlaC_arch
ABC_tran
Motif
Other DBs
NCBI-GeneID:
834917
NCBI-ProteinID:
NP_199671
TAIR:
AT5G48600
UniProt:
Q9FJL0
LinkDB
All DBs
Position
5:19701728..19709342
Genome browser
AA seq
1241 aa
AA seq
DB search
MEEDEPMGGGESEPEQRKSGTPRLYIKELVMRNFKSYAGEQRVGPFHKSFSAVVGPNGSG
KSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDSAGVSVQFEEIIDLENGLYETV
PGSDFMITRVAFRDNSSKYYINERSSNFTEVTKKLKGKGVDLDNNRFLILQGEVEQISLM
KPKAQGPHDEGFLEYLEDIIGTNKYVEKIDELNKQLETLNESRSGVVQMVKLAEKERDNL
EGLKDEAETYMLKELSHLKWQEKATKMAYEDTVAKITEQRDSLQNLENSLKDERVKMDES
NEELKKFESVHEKHKKRQEVLDNELRACKEKFKEFERQDVKHREDLKHVKQKIKKLEDKL
EKDSSKIGDMTKESEDSSNLIPKLQENIPKLQKVLLDEEKKLEEIKAIAKVETEGYRSEL
TKIRAELEPWEKDLIVHRGKLDVASSESELLSKKHEAALKAFTDAQKQLSDISTRKKEKA
AATTSWKADIKKKKQEAIEARKVEEESLKEQETLVPQEQAAREKVAELKSAMNSEKSQNE
VLKAVLRAKENNQIEGIYGRMGDLGAIDAKYDVAISTACAGLDYIVVETTSSAQACVELL
RKGNLGFATFMILEKQTDHIHKLKEKVKTPEDVPRLFDLVRVKDERMKLAFYAALGNTVV
AKDLDQATRIAYGGNREFRRVVALDGALFEKSGTMSGGGGKARGGRMGTSIRATGVSGEA
VANAENELSKIVDMLNNIREKVGNAVRQYRAAENEVSGLEMELAKSQREIESLNSEHNYL
EKQLASLEAASQPKTDEIDRLKELKKIISKEEKEIENLEKGSKQLKDKLQTNIENAGGEK
LKGQKAKVEKIQTDIDKNNTEINRCNVQIETNQKLIKKLTKGIEEATREKERLEGEKENL
HVTFKDITQKAFEIQETYKKTQQLIDEHKDVLTGAKSDYENLKKSVDELKASRVDAEFKV
QDMKKKYNELEMREKGYKKKLNDLQIAFTKHMEQIQKDLVDPDKLQATLMDNNLNEACDL
KRALEMVALLEAQLKELNPNLDSIAEYRSKVELYNGRVDELNSVTQERDDTRKQYDELRK
RRLDEFMAGFNTISLKLKEMYQMITLGGDAELELVDSLDPFSEGVVFSVRPPKKSWKNIA
NLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHYVKDRTKDAQFIII
SLRNNMFELADRLVGIYKTDNCTKSITINPGSFAVCQKTPA
NT seq
3726 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagatgagccaatgggcggcggcgagtctgagcctgagcagaggaaatctgga
actccgagactttacataaaagagcttgtcatgagaaacttcaaatcatatgctggtgaa
caacgcgtcggtcctttccacaagagtttttctgcggtggttggacctaatgggagtgga
aagagcaatgtgatagatgcaatgctctttgtatttgggaaacgagccaagcagatgcgg
ctgaacaaagtttcagagctaattcacaactcaactaatcaccagaacttggatagtgct
ggagtttctgtacagtttgaagagattatcgatttggaaaatggattgtacgaaactgtt
cctggaagcgatttcatgattactcgggttgcattccgagataattcttccaagtattat
atcaatgagaggtcgagcaatttcactgaagttaccaaaaaactcaaggggaaaggagta
gatcttgacaacaaccgtttcttgattcttcagggggaggtagaacaaatatcactcatg
aagccgaaagcacaaggtccccatgatgaaggttttcttgaatacctcgaggatataatt
ggaacgaataaatatgtggagaagatagatgaattaaataagcagcttgaaaccctcaat
gaaagccggtctggagttgtgcaaatggtgaaattagcggagaaagaaagagacaactta
gagggtttgaaggatgaggcagagacttacatgctgaaagagttatcacatcttaaatgg
caagaaaaggctacaaaaatggcatatgaagatactgtagcgaaaattactgaacagaga
gacagcttgcagaatttggaaaatagtctaaaagatgagcgagtgaaaatggatgagagt
aatgaagagttaaaaaaatttgagtctgtgcatgaaaaacataagaagagacaagaggtt
cttgataatgaacttagagcctgtaaggagaaattcaaagagtttgaaaggcaggacgta
aagcatagggaggacttgaagcatgtgaagcaaaaaatcaagaaactcgaggataaactt
gagaaggattcatccaaaatcggtgatatgacaaaggagtctgaggactcaagcaatcta
ataccgaaacttcaggaaaacataccaaagcttcagaaggtcttgctagatgaggagaag
aaattggaggaaatcaaagcgatagctaaagttgaaactgaaggttaccggtctgagctt
acaaaaattcgtgctgaattagaaccttgggaaaaagatctaattgtgcacaggggaaag
cttgatgttgcatcatccgaaagtgaactcttgagcaagaagcatgaagctgctctgaaa
gccttcacagatgctcagaaacagctctctgatatatcaacgagaaaaaaagaaaaagct
gcagcaactacctcttggaaagctgatataaagaagaagaaacaggaagcaatcgaagct
cggaaagtggaagaggaatcacttaaagaacaagaaacactcgttccacaagaacaggca
gccagagaaaaagttgctgagctcaaatcagcaatgaattctgagaagagtcagaatgag
gttttgaaggcagttttaagagcgaaggagaacaatcaaattgaaggaatatatggaagg
atgggggacttaggtgccattgatgcaaaatacgatgtcgccatatcaactgcgtgcgcc
ggccttgattacattgttgttgaaacaacttcttcagcacaagcatgtgttgagctgctg
cggaagggaaatcttggctttgcaacatttatgatattggaaaaacaaacagatcatata
cataaactgaaggagaaagtgaaaacaccagaggatgtaccacgcctctttgatcttgtc
agagttaaggatgaaaggatgaaacttgcattctatgcagccttgggaaacactgttgtg
gcaaaggatcttgatcaggcaacacgtattgcatatggtgggaacagagaatttcgaaga
gtcgtggctcttgatggcgctctctttgaaaaatctggtaccatgagtggagggggaggc
aaggcacgtggtggaagaatgggaacctctattcgagccactggtgtgtctggtgaagct
gttgctaatgcagaaaatgagctctccaaaattgttgacatgttaaacaacatccgtgaa
aaggttggaaatgctgtgagacagtatcgagctgcagaaaacgaagtctctggcctagag
atggaactggcgaaaagccaaagagagattgaaagtctcaattcagagcataattatctg
gaaaaacaactagcttccctggaagccgcatctcaaccaaagacagatgagattgacagg
cttaaagagctcaagaaaataatctctaaagaagaaaaagagattgaaaaccttgagaag
ggttctaaacagctgaaggataaactgcaaaccaacatagagaacgctggtggtgaaaaa
ttaaaaggacaaaaggcaaaggttgagaagattcagactgatatcgacaaaaacaataca
gagatcaatcggtgtaatgttcaaatagaaacaaaccagaaactgataaagaagttgaca
aaggggattgaagaggctactcgagaaaaagagaggctagagggtgagaaggaaaatttg
catgtgactttcaaagatataacgcagaaagcattcgagatccaagagacgtataagaaa
acacagcagttgattgatgagcacaaagacgtgttgactggagcaaagtccgattatgag
aacctgaaaaagtctgtggatgagttgaaggcatctagggtagatgcagaattcaaagtc
caagatatgaaaaagaaatacaatgaattagaaatgagagagaagggttacaagaagaaa
ctcaatgacttgcagattgcattcacaaagcatatggaacaaattcagaaagatcttgtt
gatccggataagcttcaagcaacattgatggataataatttgaatgaagcttgtgatctg
aaaagggctcttgaaatggttgccttactggaggctcagctgaaagagttgaatccaaat
cttgactcaatcgccgagtaccggagcaaagtggaactttacaacggacgggtagacgaa
cttaactctgtgacccaagaacgtgatgacacaaggaagcagtatgatgaattgagaaaa
agaaggttggatgagtttatggcagggtttaacactatatccttaaagctcaaagaaatg
tatcagatgatcactctgggaggtgatgcagagctggagctggtagactcgctggaccct
ttctcagaaggtgtggtattcagtgtaagacctcccaagaagagctggaagaacattgca
aacttgtcgggtggtgaaaagacactcagctcactcgcactagtctttgcactccatcac
tacaagcctactccactttacgtcatggacgaaatcgacgctgctctcgacttcaaaaac
gtatcaatcgttggacattacgtgaaagaccggactaaagatgctcagttcattatcatc
agtttgaggaacaacatgtttgagctagcagatagattggtgggaatctacaaaacagat
aactgtacgaagagcattacgatcaatcctggaagttttgcagtttgtcagaaaactcct
gcttag
DBGET
integrated database retrieval system
