Arabidopsis thaliana (thale cress): AT5G48650
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Entry
AT5G48650 CDS
T00041
Name
(RefSeq) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G48650
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AT5G48650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
834922
NCBI-ProteinID:
NP_199676
TAIR:
AT5G48650
UniProt:
Q84JH2
A0A5S9YCC8
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All DBs
Position
5:19726672..19729764
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AA seq
458 aa
AA seq
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MDSTAATKRVVDPLTVGSAFVNQYYYIFCNMPEHLPRFYQEISRVGRVGQDGVMRDFSTF
QGISEELKRLTYGDCNSAEITSYDTQESHNGGFLLFVTGYFTLNERSRRKFTQTFFLAPQ
EKGFFVLNDILRFVNDDAKDNVPETIDGEVVSGINSTTPTIINGMKGSEQAACVSVNPVC
KEVSKPLDNENAKDNVLVPEIANEVARTEITCKEVADDSQKNYDPDDGLADAPKKSYASV
LKVTKDKFGVPAVSLPSPKKIPKDQEHQAPSDPSTGQILKDQGQQASSDPSQVIESDTVS
ESVDASENGHNQEAVAEGTSIYVRHLPFNANIDMLEAEFKQFGAITNGGIQVINQRGLGY
PYGFVEFEEADAAHRAIEASPVKIGGLRAFVEEKLSTSRGKRGNGNVGYGNRNVGVGMRG
RGSYGYGYDYRRGGRGPGGGGRSFNRRGNEYVASINSY
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggattctactgctgcaaccaaacgtgttgttgacccacttactgttgggagtgcgttt
gtcaatcagtactactacattttctgtaacatgcctgagcatctgccccggttttatcaa
gagatcagtagagttggccgtgttggacaggacggagtcatgcgtgatttctccactttt
caaggtataagtgaggagcttaagagactgacttatggagattgcaactcggctgagata
accagttatgatactcaagagtctcacaatgggggtttccttctcttcgttactggatac
ttcactctaaacgagagatcgagaaggaaattcacccaaacttttttccttgccccgcaa
gaaaagggtttctttgttctgaatgacatcctcagatttgttaatgatgatgctaaggat
aatgttccagagaccatagatggggaagttgtttctgggataaactctacaacacccact
attatcaatggcatgaagggttcggagcaagctgcatgtgtttcagtgaatcctgtttgt
aaggaagtgtccaaacccttggataatgagaatgctaaggataatgttctggtacctgag
attgctaatgaagttgcaaggactgagataacttgcaaagaagttgcagatgattcacag
aaaaattatgaccctgatgatggacttgcagatgctcccaagaaatcctatgcctctgtg
ttgaaggttacgaaagataaatttggagttccagctgtctctttaccttctccaaagaag
atacctaaagaccaagaacatcaagcgccttcagatccttctacaggccagatactcaaa
gaccaaggtcaacaagcatcttcagatccttctcaagtgatagaatctgatacagtttct
gagtctgttgatgcttctgaaaatgggcacaatcaggaagcggtagctgagggtacatct
atttatgtgagacatcttccttttaatgccaacattgacatgcttgaggctgaatttaag
caatttggagctattaccaatggtgggattcaagtcataaatcaaaggggccttggttat
ccttatggttttgttgagtttgaggaggcagatgctgcccacagagcaatagaggcttca
cctgtgaagattggtggactgagagcttttgtggaggagaagctatcgacatcaagaggt
aaaagaggaaatggaaacgtgggatacggaaataggaatgtgggagtgggaatgagagga
agaggaagttatggatatggctatgattacaggaggggaggtcgaggtcctggaggagga
ggaaggtcttttaaccgtagaggcaatgaatacgtcgccagcatcaactcgtactag
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