KEGG   Arabidopsis thaliana (thale cress): AT5G48655
Entry
AT5G48655         CDS       T00041                                 
Name
(RefSeq) RING/U-box superfamily protein
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
ath  Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:ath00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G48655
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     AT5G48655
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G48655
SSDB
Motif
Pfam: zf-RING_2 zf-RING_UBOX zf-C3HC4_2 zf-C3HC4 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Rtf2 zf-rbx1 zf-Nse AP5B1_barrel zf-ANAPC11 zf-RING_10 Prok-RING_4
Other DBs
NCBI-GeneID: 834923
NCBI-ProteinID: NP_001332107
TAIR: AT5G48655
UniProt: Q8GS41
LinkDB
Position
5:complement(19730380..19733156)
AA seq 203 aa
MNTSEVRVPRGNRRRKAVIDLNAVPVDQEGTSASVRTLTVPITPSQPAPTMIDVDAIEDD
VIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRFPANISNKRRRIPSSESVIDCEHAS
VNDEVNMSSRVSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQG
KCPTCRKKVTAKELIRVFLPTTR
NT seq 612 nt   +upstreamnt  +downstreamnt
atgaacacgtcagaggtgagagtacctcgaggaaatcgacggaggaaagctgtgattgat
ctgaatgcggtacctgttgatcaagaagggacctctgcttctgttagaactcttacggtg
cctattacaccgtctcagcctgctcctacgatgattgatgtcgatgctattgaggatgat
gttattgaatcatccgctagtgcttttgctgaagctaaaagcaaatcaagaaatgcacgt
cggagacctttgatggttgatgtagagtcaggaggtacgactagattccctgccaacata
agcaacaaacgcagaaggattccttctagtgaatctgtcatcgactgtgagcatgcctct
gtaaatgatgaagtcaacatgtcttcgagagtgtctagatcaaaggctccagctcctcca
ccagaagagccaaagtttacatgtccaatctgcatgtgtccctttacggaggagatgtca
accaagtgcggtcacatcttctgcaagggatgtataaagatggcaatatctcgccagggc
aaatgccctacttgtaggaaaaaggttactgcaaaagagctgattcgagttttccttcca
accactagatga

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