Arabidopsis thaliana (thale cress): AT5G50340
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Entry
AT5G50340 CDS
T00041
Name
(RefSeq) DNA repair protein RadA-like protein
KO
K04485
DNA repair protein RadA/Sms
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G50340
DNA repair and recombination proteins [BR:
ath03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AT5G50340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
DnaB_C
ChlI
Zn_ribbon_LapB
Lon_C
AAA
AAA_22
AAA_16
NACHT
Parvo_coat
Isochorismatase
NTPase_1
AAA_19
AAA_24
AAA_14
ABC_tran
nSTAND3
Flu_NS2
MCM
Motif
Other DBs
NCBI-GeneID:
835101
NCBI-ProteinID:
NP_001318773
TAIR:
AT5G50340
UniProt:
F4K8X8
LinkDB
All DBs
Position
5:complement(20491393..20496589)
Genome browser
AA seq
627 aa
AA seq
DB search
MLSQKKTERQSRVCEIGGFRTSELRTLTSNSGERFLSLLLMLIADMRCFRCFYTRAHSLL
LLRSSNPVTVPISPVRFRLRLRRLSSSPVASVFDLHSSNQDANSNREDKDTKIGFSDDKS
RKSGSNPPRWNPGEVVMNKSKKGKSKTVWVCESCGHSEGQWWGSCRACHKVGTMKRFSEG
SESSASGGGGNGTGLGFTEGKGLSWLPEQATVQPHRLTDVIHGITQQQWRISLPGLFGNE
VARVLGGGLAPGSLILIGGDPGIGKSTLLLQIASIIAEGSELAEPAPVLYISGEESVEQI
GSRADRMRIQTEELYLFSSSDLQDILNKAHRLSPRALIIDSIQTVYLKDVTGSAGGLTQV
KECTSTLLRFAKKSNIPVFLVGHVTKAGDIAGPRVLEHIVDVVLYLEGEESSTYRLLRSV
KNRFGSTDELGVFEMANSGLEVVSNPSGIYLSQQNPDSDVLAGLAVAVVMDGSRSFLIEV
QALCSPGSTVSRHVNGVQASRADMIIAVLMKQAGLRIQENGIFLNVANGMALSETAGDLA
IAAAICSSFLEFPIPHGVAFIGEIGLGGEVRTVPRMEKRVSTVAKLGFNKCVVPKSVEES
LKALSLKEIEIIGCKNLKELINAVFKG
NT seq
1884 nt
NT seq
+upstream
nt +downstream
nt
atgctctcgcagaagaagactgagcggcaaagtcgtgtttgtgaaattggcgggtttcga
acctcggagctcagaaccctaaccagcaacagtggagaaaggtttttgagtttgttgttg
atgttgatcgcagacatgagatgcttcagatgcttctacactcgagcccactctcttctc
ctcctccgatcttccaatccggtcacggttcctatatctccggtccggttccgtcttcgt
ctccgtcgtctctcatcatctcccgtcgcctccgttttcgaccttcattcctccaatcag
gacgcgaattcgaacagagaagacaaagacaccaaaattggattctccgatgataaatcg
agaaaatcaggttcaaatcctccacgatggaatccaggggaagtagttatgaacaaatcg
aagaaagggaaatcgaaaactgtttgggtttgtgagagctgtggtcactcggaagggcaa
tggtgggggagttgtcgtgcttgtcataaggttgggactatgaaacgtttttctgaaggt
tctgagtcaagtgctagtggtggtggtggcaacggtactggcttgggttttacggagggt
aagggtttgtcttggttacctgagcaagctacggttcagccacatcgattgactgatgtt
attcatggcattactcaacaacaatggagaatttcactgcctggactttttgggaatgaa
gttgctagagtacttggtggtggtcttgctccaggttctctgattttgattggtggtgat
cctggtattggcaagagtactttgttgttgcagattgcatctataattgctgaggggagt
gagttggccgaaccagcaccggttttgtatatctctggtgaagagagtgtcgagcaaata
ggaagtcgggctgacaggatgagaattcaaactgaagagctctacctgttttcgagttcg
gatcttcaggacattctaaacaaagctcatcgactatctcctcgagctctcataattgac
tcaattcaaaccgtttacctaaaagatgtgactggaagtgctggtggtctcacacaggtt
aaagaatgcacatcaaccctgttgcgttttgctaagaaatctaatatccctgttttcttg
gttggacatgttacgaaagcgggcgatattgcaggacctcgtgttttggagcacatagta
gatgttgtcttgtacttggagggtgaagagtcatcaacgtaccgcttgcttcgatctgtg
aagaatcggtttgggtcgactgatgaacttggagtttttgaaatggcaaactcaggactt
gaagtggtctcaaacccaagtggcatatatcttagtcaacagaacccagattcagatgtt
ttagctggattagctgtagcagttgttatggatggatctcggagtttcctaattgaagtt
caggcattgtgttcccctggctcaacagtttcaaggcatgtcaatggtgttcaagcaagc
agagctgacatgataattgcagttcttatgaagcaagctggtcttagaattcaggaaaat
gggatttttctgaacgtcgctaacggaatggctctttctgagactgctggtgaccttgca
atagcagcagctatttgtagcagtttcttggagtttccaattcctcacggtgtagcattc
attggcgagattggtcttgggggagaggttcgcacggtaccaagaatggagaaaagggtg
agtacagtggcaaagcttgggtttaacaaatgtgtagttcctaaatcagtggaggaatca
cttaaggcgttgagtttgaaagagattgagataatcggatgcaagaatctgaaagagtta
atcaatgctgtgtttaagggataa
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integrated database retrieval system
