Arabidopsis thaliana (thale cress): AT5G50550
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Entry
AT5G50550 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K14003
prolactin regulatory element-binding protein
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AT5G50550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G50550
Membrane trafficking [BR:
ath04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
AT5G50550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
WDR55
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
Beta-prop_Vps41
PEP5_VPS11_N
WDR90_beta-prop_4th
Beta-prop_TEP1_2nd
Beta-prop_HPS5
Beta-prop_LRRK2
PROPPIN
KNTC1_N
DUF7165
Motif
Other DBs
NCBI-GeneID:
835123
NCBI-ProteinID:
NP_568738
TAIR:
AT5G50550
UniProt:
Q9FGP3
LinkDB
All DBs
Position
5:20576733..20579103
Genome browser
AA seq
383 aa
AA seq
DB search
MASNQQPPSNLQTYGVPIYAVDWILEEAVRSKITKDQDDDDDDGSSSSSYIVLSGGGGEG
RSGIPNVILICRVDLHTNSLSEQPIGRRVIGTDLPYRMAIHPRQGGLICALPNSCRLFDW
ENIIEDDNEEESEKVVKELKDVGQQLSLSFNQDGTVLATGAEDGTLRVFEWPSMKTLLNE
SKTHASVKSLTFSESGKFLVSLGAPLCRVWDVNASAAIASLSKEKDEMFASCRFSVDNSG
SEVLYVAANTQRGGSIITWDTTSWRRRSSKLIKRNNSISAFNVSADGKLLAVGTLEGDVL
IIDSTKMQTNQIVKKAHLGLVTALTFSPDSRCLVSVSFDSRARLTVIKQKGEKRRVYLWV
AALLFVLVYVVLYYLMVAMGIIH
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaatcaacaaccaccgtcgaatctacagacctacggtgtaccaatttacgcc
gtcgactggattctagaggaagctgtcagatccaaaatcactaaggatcaggatgatgat
gatgatgatggatcgtcgtcgtcgtcgtacatcgttttatccggcggaggaggagaagga
cgaagtggaatacctaatgtcatcttaatctgtcgtgttgatctccacaccaattctctc
tctgaacaacctattggtaggcgtgtgattggcactgatctaccttatcgtatggctatt
catcctcgtcaaggtggtcttatttgtgcattgcctaacagttgcagactgtttgattgg
gaaaacattatagaggatgataatgaggaagagtcagagaaagttgttaaagagttaaaa
gatgttggacaacagttgtctctctcgtttaatcaggatgggactgttctagctactggt
gcagaggatgggactttgagggtttttgaatggccaagcatgaagactttacttaatgag
tctaagacacatgcatcagttaaaagcctaactttcagcgaaagtggtaagtttcttgta
tctcttggagctccactttgtcgggtttgggatgtgaatgcttctgctgctattgccagt
ctatcaaaagagaaggacgagatgtttgcctcgtgtagattctctgtagacaattcaggc
agtgaagttctttatgttgctgcaaacactcaacgtggtgggagtattataacatgggat
acaacatcatggagaagaagaagttcaaagcttattaaaagaaacaactctatatctgcc
tttaatgtctcagctgatgggaagcttcttgcagtaggaaccctcgaaggagatgtttta
ataattgattcgacaaagatgcaaactaaccaaatcgtcaagaaagctcatctcggtttg
gtcaccgcactgactttctcccctgattcaaggtgcttagtgtcagtatcttttgactca
agggcaaggctaaccgtgatcaaacaaaagggtgaaaaacgtcgagtatatctgtgggtg
gcggcattgttgtttgtgttggtatacgtggttttgtattatttgatggtggcaatgggg
atcatacattag
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integrated database retrieval system
