Arabidopsis thaliana (thale cress): AT5G50920
Help
Entry
AT5G50920 CDS
T00041
Symbol
CLPC1
Name
(RefSeq) CLPC homologue 1
KO
K03696
ATP-dependent Clp protease ATP-binding subunit ClpC
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT5G50920 (CLPC1)
Chaperones and folding catalysts [BR:
ath03110
]
Heat shock proteins
HSP100
AT5G50920 (CLPC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
Clp_N
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
Sigma54_activat
AAA_22
nSTAND3
TniB
UVR
AAA_14
AAA_28
NACHT
Mg_chelatase
AAA_18
Zeta_toxin
AAA_25
IstB_IS21
Torsin
DNA_pol3_delta2
AAA_23
Motif
Other DBs
NCBI-GeneID:
835165
NCBI-ProteinID:
NP_568746
TAIR:
AT5G50920
UniProt:
Q9FI56
A0A178UE63
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:complement(20715453..20720681)
Genome browser
AA seq
929 aa
AA seq
DB search
MAMATRVLAQSTPPSLACYQRNVPSRGSGRSRRSVKMMCSQLQVSGLRMQGFMGLRGNNA
LDTLGKSRQDFHSKVRQAMNVPKGKASRFTVKAMFERFTEKAIKVIMLAQEEARRLGHNF
VGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVEKIIGRGSGFVAVEIPFTPRAKRV
LELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENLGADPSNIRTQVIRMVGENNE
VTANVGGGSSSNKMPTLEEYGTNLTKLAEEGKLDPVVGRQPQIERVVQILGRRTKNNPCL
IGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLDMGLLVAGTKYRGEFEERLKKLME
EIRQSDEIILFIDEVHTLIGAGAAEGAIDAANILKPALARGELQCIGATTLDEYRKHIEK
DPALERRFQPVKVPEPTVDETIQILKGLRERYEIHHKLRYTDESLVAAAQLSYQYISDRF
LPDKAIDLIDEAGSRVRLRHAQVPEEARELEKELRQITKEKNEAVRGQDFEKAGTLRDRE
IELRAEVSAIQAKGKEMSKAESETGEEGPMVTESDIQHIVSSWTGIPVEKVSTDESDRLL
KMEETLHKRIIGQDEAVKAISRAIRRARVGLKNPNRPIASFIFSGPTGVGKSELAKALAA
YYFGSEEAMIRLDMSEFMERHTVSKLIGSPPGYVGYTEGGQLTEAVRRRPYTVVLFDEIE
KAHPDVFNMMLQILEDGRLTDSKGRTVDFKNTLLIMTSNVGSSVIEKGGRRIGFDLDYDE
KDSSYNRIKSLVTEELKQYFRPEFLNRLDEMIVFRQLTKLEVKEIADILLKEVFERLKKK
EIELQVTERFKERVVDEGYNPSYGARPLRRAIMRLLEDSMAEKMLAREIKEGDSVIVDVD
AEGNVTVLNGGSGTPTTSLEEQEDSLPVA
NT seq
2790 nt
NT seq
+upstream
nt +downstream
nt
atggctatggccacaagggtgttggctcaatcgactccaccgtctttagcttgttaccag
aggaatgttccttcacgtggatctggaagatcgagaagatcggtgaaaatgatgtgtagt
cagttacaagtgtctggtttaagaatgcaagggtttatgggattacgtggtaacaatgct
ttagacactcttggaaaaagtcgtcaagattttcattcgaaggtgcgacaggcaatgaat
gtgcccaaggggaaagctagccggtttacggtgaaagcaatgtttgaaagatttacggag
aaagctatcaaagttattatgcttgctcaggaggaagctagaagactaggccacaatttt
gtgggaaccgaacaaattcttcttggtcttattggtgagggtactggaatcgctgctaaa
gttttgaaatccatggggattaacttaaaagatgcacgtgtggaggttgagaagattatt
ggaaggggaagtggctttgttgctgttgagatcccattcactcctcgtgccaagcgtgtt
cttgaactctctcttgaggaagctcgccaacttggtcacaattacattggatccgagcac
cttttgcttgggttgctacgtgaaggtgaaggagttgcagctcgagtccttgagaattta
ggtgcagatcctagtaatattcgcactcaggtgatacgcatggtgggtgagaacaatgaa
gtaactgctaatgttgggggaggaagcagcagcaataagatgccaactcttgaagagtac
ggaacaaacttgacgaaactggctgaggagggtaaattggacccagttgttggaaggcag
ccgcagatagaacgtgtggtgcaaattcttggcaggagaaccaagaacaacccttgtctt
attggagaacctggtgttggtaagacagctattgctgaaggacttgcacagcgtattgcc
agtggcgatgtccctgaaactattgaagggaagaaggttataacactcgacatgggtctt
ctagttgctggaacaaaatatcgtggagagtttgaagagagattgaaaaagcttatggag
gaaattagacagagcgatgagataatcttatttatcgacgaagtgcatactttgattggg
gctggagcagcagaaggtgcaattgacgcagctaacattttaaaaccagctctcgctaga
ggtgaattgcagtgcattggagcgacaacattagatgaataccgaaagcacattgagaaa
gaccctgccttggaaagaagattccagccagtgaaagtacctgaacctaccgtggatgaa
actattcagatccttaagggtctgcgagagcgatatgaaattcaccacaagcttcgttac
acagacgaatctttagtagcagctgcacagttgtcataccagtatataagtgatcgtttc
cttcctgacaaggcaattgacttgattgatgaagctggttctcgggttcgacttcgtcat
gcacaggtccctgaggaagctagggagcttgagaaggagcttaggcagataacaaaggag
aagaatgaagctgtccgtggccaggactttgagaaggctgggacacttcgggatagagaa
attgaactcagagctgaggtatctgcaatccaagcgaaaggcaaggagatgagcaaagca
gagagtgagaccggtgaggaaggccctatggtcacggagtcagacatccaacacattgtg
tcttcatggactggtattcctgttgagaaagtatcaaccgatgagtctgaccgtctcctc
aagatggaagaaaccctccacaaacgtatcataggccaagacgaagctgtgaaagccata
agccgagccattcgccgtgcacgtgttggactcaagaatcctaaccgtccaatcgctagt
ttcatattctcgggtccaaccggtgttgggaaatctgagcttgccaaagctttagcagct
tactacttcggttccgaagaagccatgattcgtctagatatgagtgagttcatggagagg
cacactgtctccaaactcatcggttcacctcctggatatgtcggatacaccgaaggaggt
cagttaacagaagcggttagacgtcgcccttacaccgtcgttctattcgatgagattgaa
aaagcccatccagatgttttcaacatgatgcttcaaatccttgaagatggtagattaaca
gacagcaaaggaagaacagttgacttcaaaaacacacttctcatcatgacatcaaacgtc
ggaagcagcgtgattgagaaaggaggaagacgtatcggattcgacttagactacgacgag
aaagacagcagttacaacagaatcaagagccttgtaacagaggagctgaaacaatacttc
agacccgagttcctaaacaggctagacgagatgattgtgttcagacagctaacaaagctg
gaagtgaaagaaattgctgacatactgttgaaggaagtgttcgagaggttgaagaagaaa
gagattgagcttcaggtgaccgaaagattcaaagagagagtagtagacgaaggttataac
ccgagctatggagcaagaccgttgagaagagccatcatgaggcttttagaggatagtatg
gcagagaagatgcttgcgagagagatcaaagaaggagactcggtgattgtggacgttgac
gctgaaggtaacgtcacggtgctaaatggtggaagtggcactccaactacttccttggag
gagcaggaagattctctccctgttgcttaa
DBGET
integrated database retrieval system
