Arabidopsis thaliana (thale cress): AT5G51450
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Entry
AT5G51450 CDS
T00041
Symbol
RIN3
Name
(RefSeq) RPM1 interacting protein 3
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
AT5G51450 (RIN3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G51450 (RIN3)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
AT5G51450 (RIN3)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G51450 (RIN3)
Multi subunit type E3
ERAD complex
AT5G51450 (RIN3)
LMBR1L-GP78-UBAC2 complex
AT5G51450 (RIN3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
zf-C3HC4_2
zf-RING_11
zf-C3HC4_4
zf-RING_16
Endonuclease_7
E3_UbLigase_EDD
zf-RING_5
zf-RING_Vps41
zf-HC5HC2H
RINGv
PHD
Motif
Other DBs
NCBI-GeneID:
835219
NCBI-ProteinID:
NP_568760
TAIR:
AT5G51450
UniProt:
Q8W4Q5
A0A654GAG7
LinkDB
All DBs
Position
5:20892643..20897959
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AA seq
577 aa
AA seq
DB search
MGITYLHISVATTALSFVGLQVWTELSLDRLRADGIITKNISLGNSENTLELLLSSHTTI
ALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPRTVFQG
VLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCWIKLSL
MIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSS
ILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTT
GMFPTETPNFTESDPWRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLAS
VGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILA
MAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQM
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggggataacatatttgcacatttccgtggcaacaacagctttgagctttgtgggttta
caagtctggacggagttgtctcttgatagacttagagctgatgggataatcaccaagaac
atttctttagggaattctgagaatacccttgagcttcttctgagttctcacactacaatt
gcattgctggcaagttttgttctcaatatctacattcttcttgttctttctctcaagact
ctgttttttggagatctatatgccattgaaactagaaaactggtggaaaggcttgccaat
tacatcatttacaagggcacttttctgccattcgtggttccacgaacagtatttcagggg
gtcctatggacaatctggttgactgttctgtgtactctaaagatgtttcaagctttggct
agagatcggcttgatcgattgaatgcatctccttcttcgactccttggacatactttcgt
gtgtattcagcactgttcatggttctctctactgatttgtgctggataaagctttccctt
atgatatacaatacagttggttcgtctgtctatttactgttactttttgagccatgcggt
atagcttttgagaccttgcaggcgttgttgattcacgggtttcaactgcttgatatgtgg
atcaaccacttagcagtcaagaattcagattgccagagatcaaagttttatgattccatg
acagcaggctcgttattggaatggaaaggcctcctcaaccgaaatcttggtttcttccta
gacatggctaccttggtaatggccctcggtcattatttgcacatctggtggctccatgga
atggccttccatctggtggatgcagttttgtttctcaacatacgtgccttgctaagttca
attttgaaacgaataaaaggatacatcaaactgagagtagctttaggtgctcttcatgca
gctcttcttgatgcaacttcagaagagctacgggattatgatgacgaatgtgctatatgt
cgggaaccaatggctaaggctaaaagacttcactgcaaccacctttttcatcttggctgc
ctacgatcatggttggatcaaggtttaaatgaggtttactcttgtcctacttgccgtaag
cctctttttgttggtagaactgaaagtgaggcgaatcctagcagaggagaagtctcaagc
gatgaacacttagcccgtcaatttgagagacaaaacaattctgtgcatgcactaaccact
ggaatgtttccaactgagacgccaaatttcaccgaaagtgatccttggaggaattcagag
gtggatccaagctggctgcaaacatggtcagatcagggtgttgatgttgtgggttcctct
gcaggctccagatccgttgggctggggcaggttcaattgatgatgaggcatcttgcatct
gtaggggaaggttctgctcagactacacttgacgatgcttcttggggtctctggccaatg
aatccttcgcaagcatcgacttcatctacatatgttcctcctggtgctggaggaagaaca
ggtggtctgcatctaagaactgtctcccgtgcagcaaataacatggcgagtatactagca
atggccgagacagtaagggaagtcctcccacatgtgcctgatgaaataatttttcaggac
ctgcaaagaacaaattctgtttctgttacagtgaacaatcttctccagatgtga
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