KEGG   Arabidopsis thaliana (thale cress): AT5G51450
Entry
AT5G51450         CDS       T00041                                 
Symbol
RIN3
Name
(RefSeq) RPM1 interacting protein 3
  KO
K10636  E3 ubiquitin-protein ligase AMFR [EC:2.3.2.36]
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    AT5G51450 (RIN3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ath04121]
    AT5G51450 (RIN3)
Enzymes [BR:ath01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.36  RING-type E3 ubiquitin transferase (cysteine targeting)
     AT5G51450 (RIN3)
Ubiquitin system [BR:ath04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    AT5G51450 (RIN3)
  Multi subunit Ring-finger type E3
   ERAD complex
    AT5G51450 (RIN3)
   LMBR1L-GP78-UBAC2 complex
    AT5G51450 (RIN3)
SSDB
Motif
Pfam: zf-RING_2 CUE zf-C3HC4 zf-rbx1 zf-RING_UBOX zf-C3HC4_3 zf-ANAPC11 zf-C3HC4_2 zf-RING_11 zf-C3HC4_4 zf-RING_16 Endonuclease_7 E3_UbLigase_EDD zf-RING_5 zf-HC5HC2H RINGv PHD FANCL_C
Other DBs
NCBI-GeneID: 835219
NCBI-ProteinID: NP_568760
TAIR: AT5G51450
UniProt: Q8W4Q5 A0A654GAG7
LinkDB
Position
5:20892643..20897959
AA seq 577 aa
MGITYLHISVATTALSFVGLQVWTELSLDRLRADGIITKNISLGNSENTLELLLSSHTTI
ALLASFVLNIYILLVLSLKTLFFGDLYAIETRKLVERLANYIIYKGTFLPFVVPRTVFQG
VLWTIWLTVLCTLKMFQALARDRLDRLNASPSSTPWTYFRVYSALFMVLSTDLCWIKLSL
MIYNTVGSSVYLLLLFEPCGIAFETLQALLIHGFQLLDMWINHLAVKNSDCQRSKFYDSM
TAGSLLEWKGLLNRNLGFFLDMATLVMALGHYLHIWWLHGMAFHLVDAVLFLNIRALLSS
ILKRIKGYIKLRVALGALHAALLDATSEELRDYDDECAICREPMAKAKRLHCNHLFHLGC
LRSWLDQGLNEVYSCPTCRKPLFVGRTESEANPSRGEVSSDEHLARQFERQNNSVHALTT
GMFPTETPNFTESDPWRNSEVDPSWLQTWSDQGVDVVGSSAGSRSVGLGQVQLMMRHLAS
VGEGSAQTTLDDASWGLWPMNPSQASTSSTYVPPGAGGRTGGLHLRTVSRAANNMASILA
MAETVREVLPHVPDEIIFQDLQRTNSVSVTVNNLLQM
NT seq 1734 nt   +upstreamnt  +downstreamnt
atggggataacatatttgcacatttccgtggcaacaacagctttgagctttgtgggttta
caagtctggacggagttgtctcttgatagacttagagctgatgggataatcaccaagaac
atttctttagggaattctgagaatacccttgagcttcttctgagttctcacactacaatt
gcattgctggcaagttttgttctcaatatctacattcttcttgttctttctctcaagact
ctgttttttggagatctatatgccattgaaactagaaaactggtggaaaggcttgccaat
tacatcatttacaagggcacttttctgccattcgtggttccacgaacagtatttcagggg
gtcctatggacaatctggttgactgttctgtgtactctaaagatgtttcaagctttggct
agagatcggcttgatcgattgaatgcatctccttcttcgactccttggacatactttcgt
gtgtattcagcactgttcatggttctctctactgatttgtgctggataaagctttccctt
atgatatacaatacagttggttcgtctgtctatttactgttactttttgagccatgcggt
atagcttttgagaccttgcaggcgttgttgattcacgggtttcaactgcttgatatgtgg
atcaaccacttagcagtcaagaattcagattgccagagatcaaagttttatgattccatg
acagcaggctcgttattggaatggaaaggcctcctcaaccgaaatcttggtttcttccta
gacatggctaccttggtaatggccctcggtcattatttgcacatctggtggctccatgga
atggccttccatctggtggatgcagttttgtttctcaacatacgtgccttgctaagttca
attttgaaacgaataaaaggatacatcaaactgagagtagctttaggtgctcttcatgca
gctcttcttgatgcaacttcagaagagctacgggattatgatgacgaatgtgctatatgt
cgggaaccaatggctaaggctaaaagacttcactgcaaccacctttttcatcttggctgc
ctacgatcatggttggatcaaggtttaaatgaggtttactcttgtcctacttgccgtaag
cctctttttgttggtagaactgaaagtgaggcgaatcctagcagaggagaagtctcaagc
gatgaacacttagcccgtcaatttgagagacaaaacaattctgtgcatgcactaaccact
ggaatgtttccaactgagacgccaaatttcaccgaaagtgatccttggaggaattcagag
gtggatccaagctggctgcaaacatggtcagatcagggtgttgatgttgtgggttcctct
gcaggctccagatccgttgggctggggcaggttcaattgatgatgaggcatcttgcatct
gtaggggaaggttctgctcagactacacttgacgatgcttcttggggtctctggccaatg
aatccttcgcaagcatcgacttcatctacatatgttcctcctggtgctggaggaagaaca
ggtggtctgcatctaagaactgtctcccgtgcagcaaataacatggcgagtatactagca
atggccgagacagtaagggaagtcctcccacatgtgcctgatgaaataatttttcaggac
ctgcaaagaacaaattctgtttctgttacagtgaacaatcttctccagatgtga

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