KEGG   Arabidopsis thaliana (thale cress): AT5G52270
Entry
AT5G52270         CDS       T00041                                 
Name
(RefSeq) SNARE-like superfamily protein
  KO
K08517  vesicle transport protein SEC22
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath04130  SNARE interactions in vesicular transport
ath04145  Phagosome
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    AT5G52270
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    AT5G52270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ath04131]
    AT5G52270
Membrane trafficking [BR:ath04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Sec22
    AT5G52270
SSDB
Motif
Pfam: Longin
Other DBs
NCBI-GeneID: 835303
NCBI-ProteinID: NP_001318788
TAIR: AT5G52270
UniProt: F4KG48
LinkDB
Position
5:complement(21221432..21222605)
AA seq 224 aa
MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD
HHSFHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKISKPYSFIRFG
KIIGRIRKQYIDTRTQANLSKLNALRKQELDVVTEHLNDIIQRQQILEKASSDPPMIVST
IWSSRCLQDISLKWTPVTIIILVILVLFKASLIMTDDYLISTMI
NT seq 675 nt   +upstreamnt  +downstreamnt
atggtgaaactaacaatagttggtagggttgaagatggattgcctcttgcacaagatcaa
acctatgtcaaccaagaggacaatactagtttcttgctgtacaagcaacaagcagaattt
cttcttaaacaagtctccaaagactcattattacatccaaagatgaccatcttgctcgat
catcattctttccacttcctggtggagaagaagatatgttacatcgcgctatctgattct
tcatatccaagaaagctattgtttaattacttgcagaatctgaacaaggagcttgataag
ctggacgagaaagcactgatccagaaaatctcaaagccctatagcttcattaggtttggt
aagatcatagggagaataagaaaacaatatatagacacgagaacacaagctaatctatcg
aagctgaatgcattgcggaaacaagaactcgatgtagttactgagcatttgaatgatata
atacaaagacaacaaattttagaaaaggcgtcctcagatcctccaatgattgtttcaacc
atttggagctcacgatgtcttcaggatatttcgttaaaatggacaccagtgacgattatt
attctcgttattcttgttcttttcaaagcaagcttgattatgacagatgattatttaatt
tcaaccatgatatga

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