Arabidopsis thaliana (thale cress): AT5G52580
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Entry
AT5G52580 CDS
T00041
Name
(RefSeq) RabGAP/TBC domain-containing protein
KO
K20168
TBC1 domain family member 15
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G52580
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT5G52580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
PH_RBD
RabGap-TBC_2
LytM_N
Motif
Other DBs
NCBI-GeneID:
835335
NCBI-ProteinID:
NP_001190524
TAIR:
AT5G52580
UniProt:
F4KG91
LinkDB
All DBs
Position
5:21337861..21343051
Genome browser
AA seq
690 aa
AA seq
DB search
MSMEATELQDLSDDADYAASQQQGSASMMRSDSGKRSLQSEHEDAVLIYLKDNVAIHPTQ
FASERISGRLKLTKQDSVLFLSWIPYKGQTSNAKLSEKDRSLYTITAVPFTEVRSIRRHT
PALGWQYVIVVLSSGLAFPPLYFYNGGVREFLAMVKQHVFLARSSEDQNVFIVNDFQSPL
QRTLSSLELPSSLPVASGQSVYPLDGGSSSENQRRTSSDVGNRVSSVSQSGFRKQKSHDP
TRDLSIHLLEKFSLVTKFARDTTTQLFSENNGFGSIDKRWNNQPVHSYPEKLSNIAEEKH
HEIRHSYSENDLLKDDEISYIDVPADPLEFDKLSLMWGKPRQPPMGHKERRNDISPSIKC
RISTEYFTALLDSEGRVVESKALRERVFYGGIEHQLRREVWPFLLGYYAYDSTYAEREYL
RSVKRMEYATLKQQWQSISPEQAKRFTKYRERKGLIDKDVVRTDRAFEYYEGDDNLHVNS
MRDILLTYSFYNFDLGYCQGMSDYLSPILFVMEDESESFWCFVALMERLGPNFNRDQNGM
HTQLFALSKLVELLDSPLHNYFKENDCLNYFFCFRWILIQFKREFEYEKTMQLWEVMWTH
YLSEHFHLYVCVAVLKRCRSKIMGEQMDFDTLLKFINELSGHIDLDSTVRDAEALCIEAG
ENGAASIPPGTPPSLPLDDGTLYPQEDDVL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgagtatggaagcaacggagctacaagatctctctgacgacgccgattacgccgcttct
caacaacaaggatcggctagtatgatgcgtagcgatagcggaaagagaagtttacaaagt
gaacacgaagacgctgtattgatttatttgaaagataacgttgcaattcatcctacacag
ttcgcatctgagaggattagtggtagattgaagttgactaagcaagactctgttctcttt
ctgtcgtggattccgtacaagggacaaacatcaaatgcaaagctatcagagaaagacagg
agtctttataccatcaccgcggttccgtttactgaagtgaggtccattaggagacacact
cctgctctcggatggcagtatgtaattgttgtcctgtcttctggacttgcatttccacct
ctgtacttctacaatggaggagtcagggagtttctggccatggtgaagcagcatgttttt
cttgcaaggtcgtcagaagatcaaaatgtgttcattgtgaatgattttcagagtcccttg
cagagaactttgtcttcattggagctgccaagttcactgcctgtagcaagtggacaatcc
gtatacccattagacggaggttcttctagtgaaaatcaaaggagaacaagttcagatgtt
ggtaatagagtatctagtgtttcccagtctggcttcagaaagcaaaagagtcatgatcca
actcgggatctttcaatccatctactagagaagttttctctggttaccaaatttgctcga
gatacaactactcagctgttttcggaaaacaatggctttggttccattgacaagagatgg
aataaccaacccgtacatagttatcctgaaaagttgtcgaacattgctgaggaaaagcat
catgaaatccgtcatagttattctgaaaatgaccttctcaaggatgacgaaatttcttat
attgatgtccctgctgatcccttagagtttgataaattaagtttgatgtggggaaaacca
aggcaaccaccaatggggcataaagagagaagaaatgatatatcaccaagcattaagtgt
agaatatcgacagagtatttcacagcattgttggattctgaagggcgagttgtggaatca
aaagctcttcgggagagagttttctatggaggcattgagcaccagttgcgtagagaggta
tggccctttctcttgggatattatgcatatgactcgacatatgcagagagagaatatctt
cgatctgtcaaacggatggaatatgcaacattgaaacagcagtggcagagcatttcccct
gaacaagcaaaaaggttcacaaaatatcgggagagaaaaggattgatagataaagatgtg
gtaagaactgatagggcatttgaatactatgaaggggatgacaatctacatgtcaatagc
atgcgtgatattctgttgacctactccttctacaattttgacctgggttactgccaggga
atgagtgattatctgtctcctatcttgttcgtgatggaggatgaatcagaatctttttgg
tgtttcgtggcactgatggaacgacttggacccaactttaaccgtgaccagaatgggatg
catactcagctctttgcactctcaaagctggtagagttgctcgatagcccgctacataat
tactttaaggagaatgactgcttgaattacttcttctgtttccgctggattctgattcag
tttaaaagggaatttgagtatgagaagacaatgcagctgtgggaggtgatgtggacccac
tacctctcggaacattttcacctatatgtttgtgtggcggtcttgaagcgatgccgcagc
aagataatgggagaacagatggattttgacactctcttaaagttcatcaatgagctgtct
gggcatattgatctcgattcaacagtcagagatgccgaagcactttgcatagaagctggt
gaaaatggtgctgctagcattcctccaggaacccctccttctctaccccttgatgacggt
accttatatcctcaggaagatgatgttttgtaa
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