Arabidopsis thaliana (thale cress): AT5G53120
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Entry
AT5G53120 CDS
T00041
Symbol
SPDS3
Name
(RefSeq) spermidine synthase 3
KO
K00797
spermidine synthase [EC:
2.5.1.16
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00270
Cysteine and methionine metabolism
ath00330
Arginine and proline metabolism
ath00480
Glutathione metabolism
ath01100
Metabolic pathways
ath01110
Biosynthesis of secondary metabolites
Module
ath_M00034
Methionine salvage pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
AT5G53120 (SPDS3)
00330 Arginine and proline metabolism
AT5G53120 (SPDS3)
09106 Metabolism of other amino acids
00480 Glutathione metabolism
AT5G53120 (SPDS3)
Enzymes [BR:
ath01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.16 spermidine synthase
AT5G53120 (SPDS3)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spermine_synth
Spermine_synt_N
Methyltransf_25
Methyltransf_23
Methyltransf_30
Methyltransf_11
Methyltransf_12
MTS
Methyltransf_31
Methyltransf_24
Motif
Other DBs
NCBI-GeneID:
835392
NCBI-ProteinID:
NP_001078748
TAIR:
AT5G53120
UniProt:
Q94BN2
A0A654GAT1
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All DBs
Position
5:21534473..21537816
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AA seq
359 aa
AA seq
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MEGDVGIGLVCQNTMDGKASNGNGLEKTVPSCCLKAMACVPEDDAKCHSTVVSGWFSEPH
PRSGKKGGKAVYFNNPMWPGEAHSLKVEKVLFKDKSDFQEVLVFESATYGKVLVLDGIVQ
LTEKDECAYQEMIAHLPLCSISSPKNVLVVGGGDGGVLREISRHSSVEVIDICEIDKMVI
DVSKKFFPELAVGFDDPRVQLHIGDAAEFLRKSPEGKYDAIIVDSSDPVGPALALVEKPF
FETLARALKPGGVLCNMAESMWLHTHLIEDMISICRQTFKSVHYAWSSVPTYPSGVIGFV
LCSTEGPAVDFKNPINPIEKLDGAMTHKRELKFYNSDMHRAAFALPTFLRREVASLLAS
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggagggagacgtcggaataggtttggtatgccagaatactatggatgggaaggcgagt
aatggaaatggtttagagaagactgtaccttcttgttgccttaaggctatggcatgtgta
cctgaggatgatgctaagtgtcactccactgttgtttctgggtggttttcggaacctcac
cctcgctctgggaaaaaaggcggcaaagcagtctatttcaacaaccctatgtggccagga
gaagcacactcactgaaagttgagaaagttctgttcaaagacaagtcggattttcaggaa
gtcctagtgttcgagtcagccacgtacggaaaggtgcttgttctagatggtatcgtacag
ctgaccgaaaaagatgaatgtgcatatcaggagatgatagcccatctgcctttatgctct
atatcttcccctaaaaatgttcttgttgttggtggaggtgatggtggtgttcttcgagag
atttctcgccatagttctgttgaggttattgatatctgtgagatagacaagatggttata
gatgtgtctaagaagttcttccccgagttagcggttgggtttgacgatcctcgtgttcaa
cttcacattggtgatgctgctgagttcctccgtaaatcccctgaagggaagtatgatgcc
atcattgttgattcttcagatcccgtaggtcctgctcttgcgcttgttgagaagcctttc
ttcgagacactggctagagcgttgaagcctgggggagttctttgtaacatggcagaaagt
atgtggctccatactcatcttattgaagatatgatctccatttgccgtcaaacattcaaa
agtgttcactatgcgtggagcagcgtccccacatatccaagcggcgtgattggtttcgtc
ttgtgctctactgaaggaccagctgttgacttcaagaacccaatcaaccctattgagaaa
ctagacggtgcgatgacccataaaagagaattgaagttctataactctgatatgcacaga
gccgcatttgctttgcccacattcctgcggagagaagtagcttcacttctggcttcttga
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