Arabidopsis thaliana (thale cress): AT5G53180
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Entry
AT5G53180 CDS
T00041
Symbol
PTB2
Name
(RefSeq) polypyrimidine tract-binding protein 2
KO
K14948
polypyrimidine tract-binding protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G53180 (PTB2)
Spliceosome [BR:
ath03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
AT5G53180 (PTB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_8
RRM_5
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
835399
NCBI-ProteinID:
NP_200130
TAIR:
AT5G53180
UniProt:
Q9FGL9
A0A654GB15
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All DBs
Position
5:complement(21568131..21571904)
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AA seq
429 aa
AA seq
DB search
MSSVSSQPQFRYTQPPSKVLHLRNLPWECTEEELIELGKPFGTVVNTKCNVGANRNQAFI
EFEDLNQAIQMISYYASSSEPAQVRGKTVYLQYSNRQEIVNNKTTADVVGNVLLVTIEGD
DARMVSIDVLHLVFSAFGFVHKITTFEKTAGYQALVQFTDAETATAAKLALDGRSIPRYL
LAETVGQCSLKITYSAHTDLTVKFQSHRSRDYTNPYLPVAPSAIDSTGQVAVGVDGKKME
PESNVLLASIENMQYAVTLDVLHMVFAAFGEVQKIAMFDKNGGVQALIQYSDVQTAVVAK
EALEGHCIYDGGFCKLHITYSRHTDLSIKVNNDRSRDYTMPNPPVPMPQQPVQNPYAGNP
QQYHAAGGSHHQQQQQPQGGWVQPGGQGSMGMGGGGHNHYMAPPSSSSMHQGPGGHMPPQ
HYGGPGPMH
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtttcaagccagccacagtttcgttacacgcaacctccttcaaaggttctt
catttgagaaacttgccatgggaatgcactgaagaggagttaattgaactcggaaagcct
tttggtactgttgttaatacaaaatgcaatgttggagctaatcgaaatcaagctttcatt
gagtttgaagatttgaatcaagctatacaaatgatatcttactatgcttcttcttcggag
cctgctcaagttcgtggtaaaactgtctacctccagtactccaacaggcaagagatagtg
aacaacaaaacgacagcggatgttgtggggaatgttcttctggtgactatcgaaggcgat
gatgctcgtatggtcagcattgatgtcttgcatctggtattctcagcatttgggtttgtc
cacaagattactactttcgagaagacagccggataccaagcactggttcaatttactgat
gcagaaactgcaaccgctgcaaaacttgccctcgatggaagaagcatccctaggtatcta
ctcgctgagaccgtgggacaatgctcacttaaaatcacatattcagctcatacagatctg
actgtcaaatttcagagtcatcggagcagggactatactaatccttaccttcccgttgct
ccatcagccattgatagtactggtcaggtggctgtgggtgtagacgggaagaagatggaa
cctgaaagtaatgttcttctcgcatctattgaaaacatgcagtatgcagtaaccttggat
gttttacacatggtttttgcggcttttggggaagttcaaaagattgcaatgtttgacaag
aatggtggggtacaggcactgatccaatactcagatgttcaaacggctgtggtggcgaag
gaagcattggaaggacattgtatctacgatggtggtttttgtaagctccacattacttat
tcacgccacaccgacctcagcataaaggtgaacaacgatagaagcagagactacacaatg
cccaacccaccggttccaatgcctcaacaacccgttcagaatccatacgccggcaatcca
cagcaataccacgcagcaggtgggagccaccaccagcagcagcagcagccacaaggtgga
tgggtccaaccaggagggcaaggctctatgggaatgggtggtggtggtcacaatcattac
atggcaccaccatcttcaagctcaatgcatcaaggtccgggtggtcatatgcctccacag
cattatggtggtcctggtccaatgcattag
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integrated database retrieval system
