Arabidopsis thaliana (thale cress): AT5G53210
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Entry
AT5G53210 CDS
T00041
Symbol
SPCH
Name
(RefSeq) basic helix-loop-helix (bHLH) DNA-binding superfamily protein
KO
K20558
transcription factor SPEECHLESS
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
AT5G53210 (SPCH)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT5G53210 (SPCH)
Transcription factors [BR:
ath03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
AT5G53210 (SPCH)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
CDC45
RPT
Fibin
DUF5427
FAM176
Motif
Other DBs
NCBI-GeneID:
835402
NCBI-ProteinID:
NP_200133
TAIR:
AT5G53210
UniProt:
Q700C7
A0A178UF96
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All DBs
Position
5:complement(21586219..21589255)
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AA seq
364 aa
AA seq
DB search
MQEIIPDFLEECEFVDTSLAGDDLFAILESLEGAGEISPTAASTPKDGTTSSKELVKDQD
YENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQQKMSHVTVERNRRKQMNEHLT
VLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVLSPRVVPSPRP
SPPVLSPRKPPLSPRINHHQIHHHLLLPPISPRTPQPTSPYRAIPPQLPLIPQPPLRSYS
SLASCSSLGDPPPYSPASSSSSPSVSSNHESSVINELVANSKSALADVEVKFSGANVLLK
TVSHKIPGQVMKIIAALEDLALEILQVNINTVDETMLNSFTIKIGIECQLSAEELAQQIQ
QTFC
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagataataccggattttcttgaagagtgtgaatttgtcgacacttcactagcc
ggagatgatctatttgccatcttagagagtcttgaaggtgccggagagatatctccgaca
gctgcatctacacctaaagatggaaccacaagttccaaggagttagttaaggatcaagat
tatgaaaactcatctcctaagaggaaaaagcaaagactagaaaccaggaaagaagaggac
gaagaagaagaagacggagacggagaagcagaagaagataataagcaagatgggcaacaa
aagatgtctcatgtaaccgtggaacgtaaccggagaaagcaaatgaacgagcacttaacc
gttttgcgttctcttatgccttgtttctacgtcaaacggggggaccaagcatcgatcata
ggaggagttgtggagtacataagcgagttacaacaagttctccaatctttggaagccaag
aaacaacgtaaaacctacgccgaagtcctaagcccgagagttgtcccgagccctcgtcct
tcaccgcctgttctaagcccaagaaaaccgcctcttagcccgcgcatcaaccaccaccag
attcaccaccacctacttctccctcccataagtcctcgaacacctcagccaacaagccca
taccgggccattccaccgcaactaccactcatcccacagcctccgcttcgctcttacagc
tcattggccagttgcagcagcttaggagatccacctccatactctcctgcttcatcttct
tcatctccttcagttagtagtaaccatgagagtagtgtgatcaatgagcttgttgctaac
tcaaaatcggctttggctgatgtggaagtgaagttttcaggagctaacgtgctgctcaaa
acggtgtcgcataagatcccgggacaagttatgaagataattgctgctcttgaagatttg
gctcttgagattcttcaggttaatattaacaccgtcgacgaaaccatgcttaattctttc
accatcaagattggaattgagtgccaactaagtgcagaagaactggctcaacaaattcag
caaacattctgctag
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