Arabidopsis thaliana (thale cress): AT5G53770
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Entry
AT5G53770 CDS
T00041
Name
(RefSeq) Nucleotidyltransferase family protein
KO
K03514
non-canonical poly(A) RNA polymerase PAPD5/7 [EC:
2.7.7.19
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT5G53770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G53770
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G53770
Enzymes [BR:
ath01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
AT5G53770
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
AT5G53770
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
AT5G53770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MTPAP-like_central
PAP_assoc
NTP_transf_2
PAP_NTPase
TUTase
DNA_pol_B_palm
Polbeta
Nrap_D2
DUF5088
Motif
Other DBs
NCBI-GeneID:
835458
NCBI-ProteinID:
NP_568798
TAIR:
AT5G53770
UniProt:
Q84WU1
A0A178UKU1
LinkDB
All DBs
Position
5:21826656..21830091
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AA seq
530 aa
AA seq
DB search
MEDSDAKTEAPAFVYDTLPPLSFSDSNQSPPPTHEESHQYSVFRKEISDFPDDTTPVESA
TVDFFSLDVEGETTENGVEPVTPVVVASKKKSKKRKKDEEPRLESNWFSENSFSKIPMLQ
LHKEIVDFCDFLLPTQAEKAERDAAVESVSSVIKYIWPSCKVEVFGSYKTGLYLPTSDID
VVILESGLTNPQLGLRALSRALSQRGIAKNLLVIAKARVPIIKFVEKKSNIAFDLSFDME
NGPKAAEFIQDAVSKLPPLRPLCLILKVFLQQRELNEVYSGGIGSYALLAMLIAFLKYLK
DGRSAPEHNLGVLLVKFFDFYGRKLNTADVGISCKMGGSFFSKYNKGFLNRARPSLISIE
DPQTPENDIGKSSFNYFQIRSAFAMALSTLTNTKAILSLGPNRSILGTIIRPDRVLSERK
GGQNGDVTFNSLLPGAGEPLPLESNGKTNGGLFCNWELEEEEEEGSFPRGNDITPVVDTP
GKKSKESSRKKKKKSKKNKEVDEDDEEEGTSTKKKKKKRRRNIVGLTWTY
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggaggactccgatgctaaaacggaagctcctgctttcgtatacgatactcttcctcca
ctttcattctcagattcgaatcaatctccaccaccaactcatgaagaatcacaccaatac
tctgttttccgcaaagagatttcagattttcccgacgacacaacgccggtggaatcagct
acggtggatttcttctcactcgatgtagaaggtgagacgactgagaacggcgtcgaacct
gtaacgccggtggttgtggcgtcgaagaagaagagtaagaagaggaagaaagatgaagaa
cctagattggagagtaattggtttagtgagaatagtttctctaagattccaatgcttcaa
ttgcataaagaaatagtagatttctgtgattttctgttaccaacacaagccgagaaagct
gagcgtgatgcagcagtggagagtgtttcaagtgttattaagtatatctggccgagttgc
aaggttgaggtttttgggtcatacaagacagggctttatcttccaacaagtgatatagat
gtggtcattctggaatcaggtctcactaatcctcagttaggtctacgcgcactctccagg
gcattatcacaaaggggaattgcgaagaatcttctggtgattgctaaggctcgtgtacca
attatcaagtttgttgagaagaaaagcaacattgcgtttgatctaagttttgatatggag
aatggaccaaaggcagctgagtttatacaggatgcagtatcaaagttgcctcctctacga
ccattatgtctaattctgaaagtatttctacagcagagagaacttaatgaggtgtacagt
ggtggaattggttcatatgcacttcttgcaatgctcattgcatttctcaagtacctgaag
gatggtcgaagcgcacctgagcataacttgggagttctattggttaaattctttgatttt
tacgggcgaaaattaaacaccgcagatgtcggtatatcttgcaaaatgggaggttctttc
ttttctaagtacaacaaaggtttcctgaacagagcccggccaagtctcatctctatcgag
gatccacagacaccagagaatgacattgggaagagctcattcaactactttcagattcga
tcagcctttgcaatggccttgtctacactaacaaacacaaaagccatcctatcgttagga
ccaaaccggagcatcctcggcactatcatcagaccagaccgggtcctatcagaacgcaaa
ggaggacaaaatggagatgtcacgttcaacagccttcttcccggagcaggagagccatta
ccattggagagtaacggcaaaaccaacggtgggcttttctgcaactgggagctcgaagaa
gaggaagaagaaggttcgttccctagagggaatgacattactccagtagttgatacccct
ggtaagaaatcaaaagagtcttctcgaaaaaagaagaagaagagcaagaagaataaggag
gtagatgaagacgacgaggaagaaggaacgagtacgaagaagaagaagaagaaacgacgg
aggaacattgttggactcacatggacctactga
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