Arabidopsis thaliana (thale cress): AT5G54520
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Entry
AT5G54520 CDS
T00041
Name
(RefSeq) Transducin/WD40 repeat-like superfamily protein
KO
K24742
WD repeat-containing protein 25
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ath04990
]
AT5G54520
Domain-containing proteins not elsewhere classified [BR:
ath04990
]
Other domain-containing proteins
WD40 repeat (WDR) domain-containing proteins
AT5G54520
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Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_DCAF12
eIF2A
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
835540
NCBI-ProteinID:
NP_200263
TAIR:
AT5G54520
UniProt:
A0A178UF32
F4K0D3
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Position
5:complement(22146504..22149302)
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AA seq
457 aa
AA seq
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MDLICNSYANDSDDEPEPVTNERLTSKIAAAPSIPSKRPYPVPEERQYKPPRRPYPPHGS
YSESQTSSSFSIPVPVPVPVPGRYVSKRERSLLASLSTIPTPDQSSDLSQKPYSSPTVLG
SISDSDVPRHVLSSVRHRPKGSSLQTEMPSRMSISLTGHTKAVTAIDWSTSHVHLLASAG
LDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVET
QSFKEDEVVGVVKFHPDNCNVFLSGGSKGSLRLWDIRANKFVHEYVRDLGPILDVEFIAG
GKQFISSSDVSGRNISENAVIVWDISREVPLSNQVYVEAYTCPCIKRHPQDPVFIAQSHG
NYTAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETLASGSSDGSVYMYDYKSTAL
IKKLKAYEQPCVNVSYHPVLPNVVAACSWNGQVSVFE
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggatctcatctgcaattcgtatgccaatgactccgacgacgaacctgagccagtgacc
aatgagcgattaacatctaaaatcgccgcagcaccgtcaattccttctaagcgtccatat
ccagtcccggaggagcgacaatacaaaccaccgcgtagaccgtatcctccacacggttcc
tattcggaatctcaaaccagctcgtcgttttcaataccggttccggttccggttccggtt
ccaggccggtacgtatccaagagagagagatcacttctagcctccctttcaacgattccg
actccagatcaaagttccgatttgagtcagaaaccttatagctctcctactgttcttggg
agcatctcagattctgatgtacctcgccatgttctatcttcggttagacatagaccaaaa
ggatcctcgttgcaaaccgaaatgcctagtagaatgtcgatttcgttaaccggccataca
aaggctgttactgctattgattggtctacaagtcatgttcatcttcttgcttctgcgggg
cttgatggtgctgtttacgtgtggaatgtgtggagtaatgataagaagaaagtacgggct
tttctccatcataatgcaccggttaaagatgtgaagtggtcaaagcaagggttatcgttg
ctttcttgtggatatgactgcacgtcgagactgtttgatgttgaaagaggggtagagaca
caatctttcaaggaggatgaagttgttggagttgttaagtttcatccagataattgtaac
gtgtttctttctggtggatcaaagggaagtcttagattatgggacattagagccaataaa
ttcgtgcatgaatatgttagagatcttgggccaattcttgatgttgagtttatcgcgggt
gggaagcagtttatctcgtcaagtgatgtttctggcagaaatataagtgagaatgctgtt
atagtttgggatatttcgagagaggttcctttatctaatcaggtctatgtagaagcatac
acatgcccttgcatcaaacgtcacccgcaagacccagtcttcatcgcgcaatcacacggg
aactacacagcaatcttctcaacaaacccacctttcaaactcaacaaatacaagagattc
gaaggtcactgggttgcaggtttcccaatcaaatgcaacttcagcccggatggagaaacc
ttagcctctggctcatctgacggttctgtatacatgtacgactacaaatccactgcgctc
attaagaagctcaaagcttatgaacagccctgcgttaatgtgtcataccaccccgtttta
cctaacgtggtcgcggcttgtagctggaatggacaagtctctgtttttgagtga
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