Arabidopsis thaliana (thale cress): AT5G56340
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Entry
AT5G56340 CDS
T00041
Symbol
ATCRT1
Name
(RefSeq) RING/U-box superfamily protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G56340 (ATCRT1)
04121 Ubiquitin system [BR:
ath04121
]
AT5G56340 (ATCRT1)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G56340 (ATCRT1)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT5G56340 (ATCRT1)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G56340 (ATCRT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-rbx1
zf-C3HC4
zf-ANAPC11
Zf_IFT144_1st
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
HypA
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
835734
NCBI-ProteinID:
NP_200445
TAIR:
AT5G56340
UniProt:
Q9FM98
A0A5S9YEJ3
LinkDB
All DBs
Position
5:22817480..22819730
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AA seq
396 aa
AA seq
DB search
MEETMAARYWCHMCSQMVNPVMESEIKCPFCQSGFIEEMSGNGGGGGGRGIRDVQDSETD
FGTDRALSLWAPILLGMMSSPRRRRRFRRSEFGEENDDNGDDLTTNADGNGNDSNNSNNN
VYRHHRARRHGGEIDLDREFESILRRRRRSSGNILQLLQGIRAGIASEYESSDNNWDNSR
ERDRVIMINPYNQSLVVPSDQNQNHPSLTSLGDYFIGPGLDLLLQHLAENDPNRQGTPPA
RKEAVEALPTVKIMEPLQCSVCLDDFEKGTEAKEMPCKHKFHVRCIVPWLELHSSCPVCR
FELPSSADDDDETKTDSERVLRTRNVRETSNGNVVENVGNADRGREDEVRSGNGRRFSFP
WPFSGLFSSSSSSSSSTSGSQSGENNFFSRSSGSSR
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacaatggcagctaggtattggtgtcacatgtgttcacaaatggtgaatcca
gtaatggaatctgagatcaaatgtcccttttgccaaagcggattcatcgaagaaatgagc
ggtaatggcggtggaggtggtggcagaggcataagagatgttcaagattcagaaaccgat
tttggaacagaccgtgcattgtctctatgggcaccaatcttgcttggaatgatgagtagt
cctcgaagacgaagaaggtttagaagatcagagtttggtgaagagaatgatgataatggt
gatgacttgactactaatgctgatgggaatgggaatgatagtaacaacagtaataataac
gtgtatcgtcatcatcgagctaggagacatggtggagagattgatttagatagagagttt
gaatctatcttgaggagaagacgaagaagctcagggaatatattgcagttgcttcaaggg
attcgtgcagggattgcttctgagtatgaaagctctgataacaattgggataattctcga
gagagggatagagttataatgattaatccgtataaccaatcgctagttgttccttcggat
cagaatcagaatcatccttcattgacttcacttggagattacttcattggacctggttta
gatcttttgcttcagcatttggctgagaatgatcctaataggcaagggactccacctgct
cgtaaagaagctgttgaagctttaccaacggttaagataatggaacctttgcaatgttct
gtttgtttggatgattttgagaaaggtacggaagctaaagagatgccttgtaagcataag
tttcatgttcggtgtattgttccctggcttgagcttcatagttcttgtcctgtgtgtcgt
tttgagcttccttctagtgctgatgatgatgatgagactaagactgattccgagagagtg
ctgagaacaagaaatgttcgggaaacgagtaacggaaacgttgttgagaatgtgggaaat
gcggatagaggaagagaggatgaggtgaggagtggaaatgggagacggttttcgtttcca
tggccgtttagtggattgttctcgtcttcttcttcttcgtcttcttcaacctctggatct
caatctggtgagaacaatttcttctcaagatcttctggttcttctcgctga
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integrated database retrieval system
