Arabidopsis thaliana (thale cress): AT5G56500
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Entry
AT5G56500 CDS
T00041
Symbol
Cpn60beta3
Name
(RefSeq) TCP-1/cpn60 chaperonin family protein
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AT5G56500 (Cpn60beta3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G56500 (Cpn60beta3)
03110 Chaperones and folding catalysts [BR:
ath03110
]
AT5G56500 (Cpn60beta3)
03029 Mitochondrial biogenesis [BR:
ath03029
]
AT5G56500 (Cpn60beta3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ath04147
]
AT5G56500 (Cpn60beta3)
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AT5G56500 (Cpn60beta3)
Messenger RNA biogenesis [BR:
ath03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AT5G56500 (Cpn60beta3)
Chaperones and folding catalysts [BR:
ath03110
]
Heat shock proteins
HSP60 / Chaperonin
AT5G56500 (Cpn60beta3)
Mitochondrial biogenesis [BR:
ath03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AT5G56500 (Cpn60beta3)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AT5G56500 (Cpn60beta3)
Exosomal proteins of other body fluids (saliva and urine)
AT5G56500 (Cpn60beta3)
Exosomal proteins of breast cancer cells
AT5G56500 (Cpn60beta3)
Exosomal proteins of colorectal cancer cells
AT5G56500 (Cpn60beta3)
Exosomal proteins of bladder cancer cells
AT5G56500 (Cpn60beta3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
KH_PARP14_2
Motif
Other DBs
NCBI-GeneID:
835751
NCBI-ProteinID:
NP_200461
TAIR:
AT5G56500
UniProt:
C0Z361
A0A178UKH6
LinkDB
All DBs
Position
5:22873666..22877407
Genome browser
AA seq
597 aa
AA seq
DB search
MASTFSATSSMGSSLAPPSNRLSSFVSISSSSFGRTQSIAQRKARFPKIYAAKQLHFNKD
GTAIKKLQAGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTVAREVELEDPVENI
GAKLVRQAASKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVLITRGIEKTTKALVA
ELKKMSKEVEDSELADVAAVSAGNNYEVGNMIAEAMAKVGRKGVVTLEEGKSAENSLYVV
EGMQFDRGYISPYFVTDSEKMCAEYENCKLFLVDKKITNARDIISILEDAIKGGYPLLII
AEDIEQEPLATLVVNKLRGTIKVAALKAPGFGERKSQYLDDIAALTGATVIREEVGLQLE
KVGPEVLGNAGKVVLTKDTTTIVGDGSTEEVVKKRVEQIKNLIEAAEQDYEKEKLNERIA
KLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLASKVDAIK
ETLANDEEKVGADIVKKALSYPLKLIAKNAGVNGSVVSEKVLSSDNPKHGYNAATGKYED
LMAAGIIDPTKVVRCCLEHASSVAKTFLMSDCVVVEIKEPESAAPAGNPMDNSGYGF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaacctttagcgcaacgtcgtcaatgggttcatctttggctcctccttcgaat
cgattgtcatcttttgtttcgatctcatcaagctcttttggaaggactcagagtattgct
cagaggaaagcaaggtttcctaaaatatatgcggctaagcaattgcatttcaataaggac
gggactgcgattaagaagcttcaagctggtgtgaataaacttgcggatttagttggggtt
actttaggtcctaaaggcaggaatgttgttctagagagcaaatacggttcccctagaatc
gttaatgatggtgttacggtcgctagagaggttgagcttgaggatccagttgagaacatt
ggtgctaagctagtgagacaagctgcttccaagactaatgacttagctggtgatggaaca
acgacttctgttgttcttgctcaaggtcttattgctgaaggtgtaaaggtggtagctgct
ggtgcaaatcctgttttgattaccagaggtattgagaaaaccaccaaagctcttgtggct
gagttgaagaaaatgtcaaaggaggttgaagacagtgaactagcagatgttgcagcagtt
agtgcaggaaacaattacgaagtaggcaatatgattgcagaagcaatggcaaaagttggt
cgtaaaggtgttgtcactctagaggaaggcaaaagcgctgagaacagcctttacgttgtt
gaaggaatgcaatttgatcgtggttatatctctccttactttgtcaccgacagtgagaaa
atgtgtgcagaatatgagaactgcaagttgtttcttgttgacaaaaagataacaaatgct
agagatattattagcattctggaagatgcgattaaaggtggatacccgcttttgatcatt
gctgaagatattgagcaagagccattagcgactcttgttgttaacaagcttcgtgggaca
ataaaagttgctgctttgaaagctcctggatttggagagaggaaaagccagtaccttgat
gacattgctgcgcttacaggagctactgtgattagggaagaagttggacttcagttggag
aaagttggaccagaagttttgggtaatgctggtaaagtggttctcacaaaagatactaca
acgatagttggtgatggaagtactgaagaagttgtgaagaagagagttgaacagatcaag
aatcttatcgaggctgctgaacaagactatgaaaaggaaaagcttaatgagagaattgct
aaattatcaggcggtgttgctgtaattcaggttggagcacaaactgagacagagcttaag
gagaagaaattaagagttgaagatgctcttaatgctacaaaggctgctgtggaagaaggt
attgttgttggcggaggatgtactctgctaagacttgcatcgaaagtggacgctattaaa
gagactctagcaaacgatgaagaaaaggttggagctgacattgttaagaaagcattgagc
tacccactgaagttaatcgccaagaacgctggtgtcaatggcagcgttgtcagtgagaag
gttctttctagtgacaaccctaaacatggttacaatgctgcaactggcaaatacgaagat
ctcatggctgcaggaatcattgatccaaccaaagttgtgagatgttgcctagagcatgct
tcatctgtggcaaagacattcttgatgtctgattgtgttgttgtggagatcaaggagcct
gaatcagcagctcctgctggtaaccctatggacaattcaggttacggcttctaa
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