Arabidopsis thaliana (thale cress): AT5G56680
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Entry
AT5G56680 CDS
T00041
Symbol
SYNC1
Name
(RefSeq) Class II aminoacyl-tRNA and biotin synthetases superfamily protein
KO
K01893
asparaginyl-tRNA synthetase [EC:
6.1.1.22
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
AT5G56680 (SYNC1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ath01007
]
AT5G56680 (SYNC1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ath03016
]
AT5G56680 (SYNC1)
Enzymes [BR:
ath01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.22 asparagine---tRNA ligase
AT5G56680 (SYNC1)
Amino acid related enzymes [BR:
ath01007
]
Aminoacyl-tRNA synthetase
Class II (A)
AT5G56680 (SYNC1)
Transfer RNA biogenesis [BR:
ath03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
AT5G56680 (SYNC1)
Prokaryotic type
AT5G56680 (SYNC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
835769
NCBI-ProteinID:
NP_200479
TAIR:
AT5G56680
UniProt:
Q9SW96
A0A654GBL1
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All DBs
Position
5:22936534..22939060
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AA seq
572 aa
AA seq
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MADEIVPPATQLAAVSLENDGSTVQRAQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVK
SGRDQGKRTFSFLAVNDGSCPANLQVMVDPSLYDVSNLVATGTCVTVDGVLKVPPKGKGT
QQQIELNVVKVIDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFA
THSFFQEHSFLYIHTPIITTSDCEGAGEMFQATTLINYTERLEQDLIDNPPPTEADVEAA
RLIVIERGNVVAELKAAKASKEAITAAVAELKIAKETFAHIDERSRLRPGLPKKDGNIDY
SKDFFGRQAFLTVSGQLQVETYACALSNVYTFGPTFRAENSHTSRHLAEFWMVEPEIAFA
DLEDDMNCAEAYVKYMCNWLLEKCYADMELMAKNFDSGCIDRLKLVASTPFGRITYTKAI
ELLEEAVAKGKEFDNNVEWGIDLASEHERYLTEVLFQKPLIVYNYPKGIKAFYMRLNDDE
KTVAAMDVLVPKVGELIGGSQREERYDVIKKRIEEMGLPIEPYEWYLDLRRYGTVKHCGF
GLGFERMILFATGLDNIRDVIPFPRYPGKADL
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgagattgtgccgccggcgactcaattagccgccgtatccttagaaaacgat
ggatctacggtgcaaagagctcaattctctaaccgggttttgattcgaacgattttggat
cgacctgacggcggagctggactcgccggtcaaacggttcgaatcggtggttgggtaaaa
tccggaagagatcaagggaaaagaacgttttctttccttgcggttaacgatggatcttgt
ccagcgaatcttcaggttatggtggatccgtctctctatgatgtctctaacttggttgct
acgggaacttgtgtgactgttgatggagttttgaaggttccaccgaaaggtaaaggtacg
cagcagcagattgagcttaacgttgtgaaggtgattgatgttggaacggtggatgcgtct
aagtatccacttcctaagactaagttgactcttgagactttgagagatgtgcttcatctt
cgttctagaactaactcgatctcagctgttgcaagaattcgtaatgctcttgcttttgcg
actcacagtttctttcaagagcatagtttcctttacattcacactcctatcatcacgaca
agtgattgtgaaggtgctggtgaaatgttccaagcaacaactttgatcaattacactgag
aggttggagcaggatctcattgataaccctccgcctactgaggctgatgttgaagctgcg
aggctcattgtcattgagagaggtaatgttgtagcggaactgaaagctgccaaagcaagc
aaggaagcgatcactgctgctgttgctgaacttaaaatagcaaaggagacttttgctcat
attgatgagaggtcgaggcttagacctggactacctaagaaagatggaaacattgattat
tccaaggatttctttggtcgtcaagctttcttgacagtttccggtcaattacaagtggag
acctatgcttgtgctcttagcaatgtgtatacatttggcccgactttccgggcagagaac
tctcacacttcaaggcatcttgctgaattctggatggttgagcctgagattgcttttgca
gatctagaggacgacatgaactgtgcagaggcgtatgtgaaatacatgtgcaactggttg
cttgagaaatgttacgctgacatggaacttatggctaagaatttcgactcaggatgcatt
gacaggctaaaattggttgcctctactccgtttgggcgtataacatacactaaagcaata
gagctacttgaggaagctgtggctaaaggaaaggaatttgataacaatgtggagtgggga
atcgacttagcctcggagcatgaaagatacttgacagaggttctgtttcaaaagccactt
attgtctataactacccgaaaggaatcaaagctttttacatgagacttaacgatgatgag
aagacagttgctgccatggatgtcctcgttccaaaggttggagaactcattggtggaagc
caaagggaagaacgatatgatgtcatcaaaaagaggattgaggagatgggtcttccaata
gagccatatgagtggtacctagacttgcgccgttatggaacagtgaagcattgtgggttt
ggacttggcttcgaacgtatgattctcttcgctactggacttgataacatcagagacgtt
attcctttccctcgctatcctggaaaagctgatctttga
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