Arabidopsis thaliana (thale cress): AT5G58180
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Entry
AT5G58180 CDS
T00041
Symbol
ATYKT62
Name
(RefSeq) Synaptobrevin family protein
KO
K08516
synaptobrevin homolog YKT6
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
AT5G58180 (ATYKT62)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G58180 (ATYKT62)
Membrane trafficking [BR:
ath04131
]
SNARE
VAMP, Ykt6, Sec22 (R)
Ykt6
AT5G58180 (ATYKT62)
BRITE hierarchy
SSDB
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Gene cluster
GFIT
Motif
Pfam:
Synaptobrevin
Longin
AcrIIA4
Motif
Other DBs
NCBI-GeneID:
835930
NCBI-ProteinID:
NP_001318826
TAIR:
AT5G58180
UniProt:
Q9LVM9
A0A5S9YF49
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Position
5:23543652..23545760
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AA seq
199 aa
AA seq
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MKITALLVLKCDPETREPVILANVSDLSQFGKFSFYRSNFEEFIVFIARTVARRTPPGQR
QSVKHEEYKVHAYNINGLCAVGFMDDHYPVRSAFSLLNQVLDVYQKDYGDTWRFENSSQP
WPYLKEASDKFRDPAEADKLLKIQRELDETKIILHKTIDGVLARGEKLDSLVEKSSELSL
ASKMFYKQAKKTNSCCTLL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcactgccttgctcgttctcaagtgcgatcccgaaacacgcgaacccgttatc
ctggccaacgtttccgacctctcacaattcggaaaattctctttttatcgctctaacttc
gaagagttcattgtattcattgcccgtactgttgccagaagaacccctccaggtcagcgc
caatccgtcaaacacgaagagtataaagtgcacgcttacaacataaatggcctctgcgcc
gtaggattcatggacgaccattatcccgttcgaagtgccttttctcttctcaatcaggta
ttagatgtataccagaaggattatggtgacacatggaggtttgaaaactctagtcagccg
tggccatacttaaaagaagcttcagacaaatttcgggacccggcagaagctgataagctg
ttgaaaatccagagggaattggatgagaccaagattatccttcataaaaccattgatggt
gtcctagcccgaggtgaaaagctggacagcttagtggagaagagctcagagttaagcctg
gcatcgaagatgttttacaagcaagcgaagaaaacaaactcatgttgtacacttctctaa
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