Arabidopsis thaliana (thale cress): AT5G58470
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Entry
AT5G58470 CDS
T00041
Symbol
TAF15b
Name
(RefSeq) TBP-associated factor 15B
KO
K13098
RNA-binding protein FUS
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT5G58470 (TAF15b)
09122 Translation
03015 mRNA surveillance pathway
AT5G58470 (TAF15b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT5G58470 (TAF15b)
Spliceosome [BR:
ath03041
]
Complex A
Other components
Complex A specific factors
AT5G58470 (TAF15b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Zn_ribbon_RanBP
Motif
Other DBs
NCBI-GeneID:
835960
NCBI-ProteinID:
NP_851215
TAIR:
AT5G58470
UniProt:
Q94KD0
A0A178UTZ9
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All DBs
Position
5:complement(23637415..23640973)
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AA seq
422 aa
AA seq
DB search
MAGMYNQDGGGGAPIPSYGGDGYGGGGGYGGGDAGYGGRGASGGGSYGGRGGYGGGGGRG
NRGGGGGGYQGGDRGGRGSGGGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSGTSSG
ANDRGGGGYSRGGGDSDRGGGRGGRNDSGRSYESSRYDGGSRSGGSYGSGSQRENGSYGQ
APPPAAAIPSYDGSGSYPPPTGYGMEAVPPPTSYSGGPPSYGGPRGGYGSDAPSTGGRGG
RSGGYDGGSAPRRQEASYEDAATEKVKQCDADCDDNCDNARIYISNLPPDVTTDELKDLF
GGIGQVGRIKQKRGYKDQWPYNIKIYTDEKGNYKGDACLAYEDPSAAHSAGGFFNNYEMR
GNKISVTMAEKSAPRAPTFDQRGGGRGGGGGGYGGGGGDRRRDNYSSGPDRNHHGGNRSR
PY
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatgtacaatcaagacggcggcggaggtgcgcctattccgtcgtacggtggt
gatggatacggcggagggggaggttatggaggtggtgatgctggatatggtggacgcggt
gcctctggcggaggtagttacggcggacgcggtggttacggtggaggcggtggtagagga
aatcgaggcggtggaggtggtggatatcaaggaggtgatcgcggtggaagaggaagtggc
ggcggaggcagagatggagattggcgttgtcccaaccccagttgtgggaacgtgaacttt
gcaaggagagttgaatgtaacaagtgtggtgcacttgctccttctggtactagttctggt
gctaatgatcgtggaggtggtggatatagccgaggtggaggtgacagtgatcgtgggggt
ggtcgtggtggtagaaacgatagtggtaggagctatgagagtagtagatatgatggtgga
agtaggagtggtggtagctatggtagtggtagtcagagggaaaatggttcgtatggtcag
gctcctcctcctgctgcagctattccatcctacgatggttctggaagttatcctccaccc
acgggttatggaatggaagctgttcccccgcctacaagctattctggtggcccgccgtca
tatggtggtccacgagggggttatggcagtgatgcaccgagcactggtggtcgtggtggt
aggagtggcggctatgatggtggtagtgctcctcgacggcaggaagctagttatgaagat
gcagctactgaaaaagtcaagcagtgcgatgctgattgtgatgataattgtgataatgct
agaatatacatctctaatttacctccggatgtgacaactgatgaactcaaggatctcttt
ggtggcattggccaagttggaagaattaagcagaagcgtggttacaaagatcagtggccc
tataatattaagatttacactgatgagaagggtaactataaaggtgacgcctgtctggct
tatgaagatcccagcgctgcacactctgcaggcggctttttcaacaattacgaaatgagg
gggaacaagattagtgtaacgatggcagaaaagtctgcgccccgtgctcctacctttgac
cagagaggtgggggtagaggaggaggaggtggtggctatggtggtggtgggggagacaga
agaagagacaactacagttcagggccagacagaaaccaccatgggggaaaccggtctcgt
ccatattga
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