Arabidopsis thaliana (thale cress): AT5G58980
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Entry
AT5G58980 CDS
T00041
Name
(RefSeq) Neutral/alkaline non-lysosomal ceramidase
KO
K12349
neutral ceramidase [EC:
3.5.1.23
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00600
Sphingolipid metabolism
ath01100
Metabolic pathways
Module
ath_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
AT5G58980
Enzymes [BR:
ath01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.23 ceramidase
AT5G58980
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ceramidase_alk
Ceramidse_alk_C
Motif
Other DBs
NCBI-GeneID:
836015
NCBI-ProteinID:
NP_200706
TAIR:
AT5G58980
UniProt:
F4KHQ8
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All DBs
Position
5:complement(23811449..23814683)
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AA seq
733 aa
AA seq
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MTRWSMSMHCTLFLLFLLRLTCIFSDSDYLMGLGSYDITGPAADVNMMGYANMEQVASGV
HFRLRARAFIVAEPYKKRIAFVNLDAGMASQLVTIKVIERLKQRYGELYTEENVAISGTH
THAGPGGYLQYILYLVTSLGFVHQSFNALVDGIEQSIIQAHENLRPGSILINKGELLDAG
VNRSPSAYLNNPAHERSKYEYDVDKEMTLVKFVDDQWGPVARIMEDWFERENGCRSVDVE
SPRRVSSIISDPYDQDLMEMASSLLSTGGKTVTRMSSVARRVRSRFRHADKPRFVSAFCQ
TNCGDVSPNVLGAFCIDTGLPCEFNQSTCGGKNEQCYGRGPGYPDEFESTRIIGERQFKK
AADLFTKASEEIQGKVDYRHAYVDFSQLEVTINGQNGGSEVVKTCPAAMGFGFAAGTTDG
PGAFDFKQGDDQGNPFWRLVRNLLKNPTEEQVRCQRPKPILLDTGEMKQPYDWAPSILPV
QILRIGQLVILCVPGEFTTMAGRRLRDAVKTVLKEGSNGREFSVVIAGLTNSYSQYIATF
EEYQVQRYEGASTLYGPHTLSGYIQEFKKLANDLLSAQTTDPGPQPPDLLHKQISLLTPV
VADMTPIGTAFGDVTSDVPRLSKFRKGADIVRVQFRSANPRNDLMTEGTFALVERWLEGR
ETWVPVYDDDDFCLRFKWSRPFKLSTQSTATIEWRIPETASPGVYRITHFGSAKTPISSI
HHFSGSSSAFVVY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgacgaggtggtctatgtctatgcactgcacattgttcttgctatttctgttgaggctc
acttgtatattctcagattccgattatttgatgggtcttggaagctatgacatcacagga
cctgcagctgatgttaacatgatgggttatgctaacatggaacaagtagcatctggtgtt
cacttcaggctcagagctcgtgcgttcatcgtggctgagccatacaagaaaaggattgct
tttgttaatcttgatgctggtatggcctcacagcttgtgaccatcaaagtgattgaaaga
ttgaaacagaggtacggtgagctttatacggaggaaaatgttgcaattagtggaactcat
actcatgctggtccagggggttatctccaatacattttgtacttagttacatctctcggg
tttgttcatcaatctttcaatgctcttgtggacggtatagagcaaagtattatacaagct
catgaaaatcttcgtcccgggtccattttaatcaacaaaggggagctcttggatgctggt
gtgaaccgtagtcccagtgcttaccttaacaatccggcacatgaacgtagtaaatatgaa
tatgatgtagataaagagatgacacttgtcaaattcgttgatgatcaatggggtccagtg
gcacgtatcatggaagactggtttgaacgagaaaacggttgtagatcagttgatgttgaa
tctcctagaagagtctcaagcataatcagtgatccttatgatcaagatttgatggaaatg
gcatcctcgttactgtctaccggcggtaaaaccgttacaaggatgtcaagcgttgctaga
cgggtcagaagtagatttagacacgctgacaaacctagatttgtctctgccttctgtcaa
actaactgcggtgatgttagtccgaatgtgttgggagccttctgtatagacacaggcctt
ccttgtgaattcaaccaaagtacttgtggtggaaagaatgagcaatgctacggccgtgga
ccaggctaccctgatgaatttgagagtacccgcattattggagagaggcagttcaagaag
gctgcggatcttttcactaaagcctctgaggagatacaaggaaaagttgactatcgtcat
gcatatgttgatttctctcagcttgaagtgacgattaatggacaaaatggaggttccgaa
gtggtgaaaacatgtccagctgcaatgggttttggtttcgctgcaggaacaactgatgga
cctggagcatttgactttaaacaaggagatgatcagggaaatcctttctggaggcttgta
aggaaccttctcaagaatccaactgaggaacaagtacgatgccaacgacctaaacccata
ttgcttgataccggtgaaatgaaacaaccatacgactgggcgccgtcgatattaccagtt
cagatcctccgcattggccagctagtgattctctgcgtccccggagaattcacaacaatg
gcagggaggcgactacgtgatgccgtgaaaacagtgcttaaagaaggcagcaatggaaga
gaattcagcgtggtaatagccgggctaaccaattcgtattcgcagtatattgccacattt
gaggaataccaagttcagagatatgagggtgcatcgactttgtatggacctcacacgcta
agcggatacattcaagaattcaagaaactagcaaatgatcttctatctgctcaaaccact
gacccgggtccccaaccacctgacttacttcacaagcaaataagcttactaacacctgtt
gttgcggatatgacaccaattggaactgcattcggagatgttacatcggatgttcctcgg
ttatccaaattcaggaagggagctgacatagtgagggttcaattccggtcagctaacccg
agaaacgatctgatgacggaaggaactttcgcgcttgttgagaggtggctcgaaggaaga
gagacatgggtacctgtttatgatgatgatgacttttgcctccggtttaagtggtcaaga
ccgtttaaactcagcacgcagagcacagcaactatcgaatggagaatccctgaaaccgca
tcacctggtgtttatagaatcactcactttggttcagctaaaactcctataagctccatt
caccatttctctggttcatctagtgcctttgttgtatattga
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