Arabidopsis thaliana (thale cress): AT5G59550
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Entry
AT5G59550 CDS
T00041
Symbol
RDUF2
Name
(RefSeq) zinc finger (C3HC4-type RING finger) family protein
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ath04131
]
AT5G59550 (RDUF2)
04121 Ubiquitin system [BR:
ath04121
]
AT5G59550 (RDUF2)
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G59550 (RDUF2)
Membrane trafficking [BR:
ath04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
AT5G59550 (RDUF2)
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
AT5G59550 (RDUF2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-ANAPC11
zf-RING_5
zf-RING_16
zf-C3HC4_3
zf-RING_10
zf-C4
Motif
Other DBs
NCBI-GeneID:
836074
NCBI-ProteinID:
NP_568910
TAIR:
AT5G59550
UniProt:
Q940T5
A0A5S9YGN4
LinkDB
All DBs
Position
5:complement(23998164..24000166)
Genome browser
AA seq
407 aa
AA seq
DB search
MPSTPTTPTTTTPITASYWCYSCTRFVSVWADQGTTTVGSVACPHCDGGFIEQINDSSSA
ATELTIPASTEVRSINNNRRSVIRRRRSGRRPSFNPVIVLQGGAGEREEGEEGDAARDRR
AFEFYYDDGSGSGLRPLPDSVSEILMGSGFERLLEQLSQIEASATGIGRSGNPPASKSAI
ESLPRVEISDCHIGSEANCAVCTEIFETETEAREMPCKHLFHDDCIVPWLSIRNSCPVCR
FELPSEPNRRSNNNEEDNAVGMTIWRLPGGGFAVGRFNAAMRDGERVLPVVLTEMDGGGI
GNSQDGPRRISWVRSHGTLESDSNGTGSGSGSGGRLRRMVRGMVSLMRRVRPNRSSSSSS
AAISTSSDNLDLNIEVESRVLDRSNSVMRRYFRRNRSNRDSSSSVLH
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcaacgccgacgacgccgactacaacaacgccgatcacggcttcgtattggtgt
tacagctgtacgcgtttcgtcagcgtttgggctgatcaaggcacaacaaccgtcggtagc
gtcgcttgccctcactgcgacggcggttttatcgaacagattaacgattcttcctccgcc
gctaccgaattaacgattccggcttctactgaagtaagatcgatcaataacaaccgtaga
tccgtgattagacgccggagatccggtcgtcgtccgtcctttaatccggtcatcgtactt
caaggaggcgccggcgagagagaagagggagaagaaggagatgcggctagagatcgacgc
gcttttgagttttattacgatgacggatccggatcgggtcttagaccgcttccggattct
gtatctgagatcttgatgggatctggattcgagcggttacttgaacagctaagccaaatc
gaagcgtcggctactggaattggtagatctggaaaccctccggcgtctaaatcggcgatt
gagtctttacctagagtcgaaatctcggattgccacataggctcggaggctaattgcgct
gtttgcacggagattttcgagacggagacggaggcgcgtgagatgccgtgtaaacacctt
ttccacgacgattgcatcgtaccgtggctatcgattcgaaactcttgtcccgtgtgcaga
ttcgagctaccttcagagcctaatcgacggagcaacaacaacgaggaggataacgccgtg
gggatgacgatttggagacttcccggtggtggattcgccgtagggaggtttaacgcagca
atgagagacggagagagagttttgccagtggtgttaacagaaatggatggtggtgggatt
ggtaatagccaggatggtcctagacggatctcatgggttaggtcacacggtacactcgaa
tcggatagtaacggtactggctcaggttccggctccggtggaagattgaggaggatggtt
cgtggaatggtgtcgttaatgaggagagtgagaccaaaccgtagctcttcttcttcatca
gctgcgatatcaacttcttctgataatctggatttgaacattgaagtagaatctagggtt
ttggataggtcaaattcagtgatgagaagatacttcagaagaaacagaagtaacagggat
tcttcgtcttcagttcttcattga
DBGET
integrated database retrieval system
