Arabidopsis thaliana (thale cress): AT5G60470
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Entry
AT5G60470 CDS
T00041
Name
(RefSeq) C2H2 and C2HC zinc fingers superfamily protein
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ath03000
]
AT5G60470
Transcription factors [BR:
ath03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
AT5G60470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2H2-2nd_BIRD-IDD
C2CH-4th_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-C2H2_fungi_2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
836168
NCBI-ProteinID:
NP_200855
TAIR:
AT5G60470
UniProt:
F4JYZ8
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All DBs
Position
5:24320411..24322939
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AA seq
450 aa
AA seq
DB search
MTASHSLALSMTKSTSPLILTLTLSLQPPLKHPRKRETFQEIQAYPNAEVISLSPKSLMA
TNRFFCEICNKGFQREQNLQLHKRGHNLPWKLKQKTNKNQVKKKVYICPEKSCVHHDPAR
ALGDLTGIKKHFSRKHGEKKWKCDKCSKKYAVISDWKAHNKICGSREFRCDCGTLFSRKD
SFISHRSFCDVLAEESSKFFSVPSPLAANSTIATVTDTNNPILIQSQLDQSSTGTADLNV
NNNHTTLFGQKFTNSNPTQQQPNALALSSPPSPRSTSDSVHNLWKLQEEECAHQWLLNEY
MNNNKNIFHKGIFKNQEDEIKKGNIYSGSNPTDGNIASLFSYNQEAVNMASFSATTLLQK
VAQTGTPSSSETSTTMFGQMTSSIFNNTMLNSYCLTAKNNEEELTRDFLGVGSSEDQQRL
HRHRFPSSVPLTANHDIPKLAATIVGRKQP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcctctcattctctagctttgtccatgaccaagagcacatcacccctaatcctt
accctaactctcagcctgcagcctccactaaaacacccaagaaaaagagaaaccttccag
gaaatccaggcatatccaaatgcagaagtcatctctctatctccaaaatccctcatggcg
acaaatcggttcttttgtgaaatttgtaacaaggggtttcagagagaacagaaccttcag
ctccacaaaagaggccacaacctgccatggaagctgaagcagaaaacgaacaagaatcag
gtgaagaagaaagtttatatatgccctgagaagagttgcgtccatcatgatccagctcga
gccctaggagaccttactggaataaagaagcactttagcaggaaacatggagagaagaag
tggaaatgcgataagtgttccaagaagtatgctgtgatatccgattggaaagctcataac
aagatttgtggtagcagagagtttagatgtgattgtggtactcttttctccaggaaggac
agtttcatctcacatagatccttctgtgatgtcttagctgaagaaagttctaaattcttc
tcagttccttcaccattagccgccaattcgaccatcgccactgtcactgataccaacaat
ccaattctcattcaatcacaattggatcaatcttccacaggtacggccgatcttaacgtc
aacaacaatcacaccaccctatttggacaaaagttcaccaactccaacccaacccaacaa
caacccaatgctttggcgttgtcctcaccaccatcacctcgtagtacatctgattcggtt
cataatctatggaagttacaagaagaggaatgtgcacaccagtggttactcaatgaatat
atgaacaataacaaaaacatattccataagggaatattcaagaatcaagaagatgagata
aagaagggaaatatctacagcggctcaaacccaaccgatggaaacatagcatccttgttc
tcgtataatcaagaagcagtgaatatggcttcattttcggcaacaacattgcttcaaaag
gtagctcaaacgggaacaccatcaagctccgaaactagcaccaccatgtttgggcaaatg
acttcctccatcttcaacaatacgatgctaaactcctattgtttaacggcgaagaataat
gaagaagagttgaccagagactttcttggtgtgggaagtagtgaggaccaacaacgtcta
catcgtcatcgcttcccatcaagcgtgccattgacggcgaaccatgatattcccaagttg
gccgcaaccattgtaggcaggaagcaaccatag
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