Arabidopsis thaliana (thale cress): AT5G60980
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Entry
AT5G60980 CDS
T00041
Name
(RefSeq) Nuclear transport factor 2 (NTF2) family protein with RNA binding (RRM-RBD-RNP motifs) domain-containing protein
KO
K24983
Ras GTPase-activating protein-binding protein 2
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT5G60980
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
AT5G60980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
Ig_NUP210_2nd
Motif
Other DBs
NCBI-GeneID:
836219
NCBI-ProteinID:
NP_001331368
TAIR:
AT5G60980
UniProt:
Q9FME2
A0A654GD21
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All DBs
Position
5:24543136..24546352
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AA seq
460 aa
AA seq
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MAQQEASPSPGAEVVGRAFVEQYYHILHQSPGLVHRFYQDSSFLTRPDVTGAVTTVTTMQ
AINDKILSLKYEDYTAEIETADAQESHERGVIVLVTGRLTGNDNVRKKFSQSFFLAPQDK
GYFVLNDVFRFLEEKEVTAQARSVPINGTTRDVQAPIEPERVVVSHEPEVEPEPVASIEE
EDLDNVAEVYDPSDKDEGVVVDVEPIEPPTQISHNEILSVPQGDAPKHSYASILKQMKSS
PAPTTHVARNKPRPAPVNQKLTAPPAEPAARPEASAHENVPNSSHVDVEDDGHSIYVRNL
PFDSTPTQLEEVFKNFGAIKHEGIQVRSNKQQGFCFGFVEFETSSGKQSALEASPVTIGD
RQAVVEEKKTNSRGGGNNGGSRGRYFSGRGSFRNESFKGGRGGGGRGGYGRGGGEFSGRP
KSSNPRNGGEGYQRVPQNGGGGRGGRGEGGRGGARGGGSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggcacagcaggaagctagtccttcccctggtgctgaggttgttggtcgtgcctttgtg
gagcaatactatcatattcttcaccaatctcccggtttagttcatcggttttatcaagat
tcgagctttttaacccgacctgatgttaccggtgctgtgactactgtcacaactatgcaa
gcgatcaacgacaagattctgtcgttgaaatatgaagactacacggctgagatagaaact
gctgatgctcaggagtctcatgagagaggtgttattgtgctggttacaggacgcttaacc
gggaacgataatgttaggaagaagtttagtcaatcttttttcttggctccacaagacaaa
ggatactttgtcttaaacgacgtgtttcgattccttgaggagaaagaggtgactgcacaa
gcccgctctgtccccatcaatggaaccactagggatgttcaggctcctattgaaccagaa
cgtgttgttgttagtcacgagcccgaggtagaacccgagccagttgcttctatcgaggaa
gaagatcttgacaatgtggcggaagtgtatgatccttctgataaagatgaaggagttgtt
gttgacgttgagcctattgaacctcccactcaaataagtcataatgaaatcttatcagtg
cctcaaggagatgctcctaagcattcttatgcttcaatcctcaagcagatgaaaagcagt
ccagcaccaacaacacacgttgctagaaacaagccaagaccagctccagtcaaccagaag
ctgaccgcgcctcctgctgagcctgcagcaagacccgaggcttcagctcatgagaatgtt
ccgaatagtagccatgttgatgtggaagatgatggtcattcgatttatgttcgaaatttg
ccgtttgactccacaccaacacaacttgaagaggtgttcaagaactttggtgcaatcaag
catgaggggattcaagtcagaagcaacaagcagcaaggtttctgttttggttttgtggaa
tttgaaacatctagcggaaagcaaagtgccctcgaggcctcaccagttacaattggagat
cgtcaagctgttgtagaggagaagaaaacaaatagtcgaggaggaggcaacaatggaggt
agcaggggaaggtacttttccggaagaggaagtttccgaaatgaaagcttcaaaggagga
cgcggtggtgggggaagaggaggctatggaagaggaggaggtgagttttctggtagacca
aagagctcaaacccacgaaatggaggagaaggttaccaaagggttcctcaaaacggagga
ggtggaagaggaggccgcggagaaggaggtcgtggtggagctcgaggtggtggttcatct
tga
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