Arabidopsis thaliana (thale cress): AT5G62270
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Entry
AT5G62270 CDS
T00041
Symbol
GCD1
Name
(RefSeq) ribosomal protein L20
KO
K27351
small ribosomal subunit protein mS75
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
AT5G62270 (GCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
ath03011
]
AT5G62270 (GCD1)
Ribosome [BR:
ath03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
AT5G62270 (GCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MRP-L20
Bot1p
Motif
Other DBs
NCBI-GeneID:
836348
NCBI-ProteinID:
NP_001190596
TAIR:
AT5G62270
UniProt:
Q9LVA9
A0A178UHU2
Structure
PDB
PDBj
LinkDB
All DBs
Position
5:25011957..25014812
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AA seq
420 aa
AA seq
DB search
MYNLSRIIYRFSSVSLNPSTRASGFLLENASSKILQSATNRAFSAKSGSDGVGGDDNGWN
ISTGGSFGGTGSADLDWDNKSMWSTGLTKEHFDGVSVGRQKNAANPSSDNTPSDSGDVMS
KLGPKEVALVNEMNEYDDLLKEIEQDNRQGRAFVDGIKQRMMEISVLLKQVKEPGARGSY
LKDSEKTEMYRLHKENPEVYTIERLAKDYRIMRQRVHAILFLKEDEEEEERKLGRPLDDS
VDRLLDEYPEFFISHDREFHVASLNYKPDFKVMPEGWDGTIKDMDEVHYEISKKEDDMLY
EEFVRRFEFNKMKWRGEVMCHKYSRRRSSEGWKITVEKLGAKGKRGAGGGWKFMSLPDGS
SRPLNEMEKVYVKRETPLRRRSIISTEVMRYSPANQKRRSKRKQKRKERRIACLKAGKQT
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgtataaccttagtaggatcatttatcgtttctcctcggtttcacttaaccctagcacg
agagcatctgggtttctacttgagaacgcttcatcaaaaatcttacaatctgctacgaat
cgagcattttctgcaaaatcaggatctgatggagttggaggcgatgataacggctggaat
atttcaacaggaggatcatttggtggtacaggatctgctgatcttgattgggacaataaa
tctatgtggtctactggtttaactaaggagcatttcgatggtgtctccgttggtcgtcag
aagaacgcggcgaatccttcttctgataacaccccttctgattcgggtgatgtaatgagc
aaattgggtccaaaggaggtagctttggttaatgaaatgaatgagtatgatgatttgctt
aaagagattgagcaagataataggcaaggcagggcttttgttgatgggattaaacagaga
atgatggagatcagtgtgttgttgaagcaagttaaagagccaggtgctagagggtcttat
cttaaggactctgagaagactgagatgtatagattgcacaaagagaatcctgaggtgtat
actattgagaggcttgctaaggattataggattatgaggcagcgtgttcacgccattctt
tttcttaaagaagatgaagaagaagaggagaggaagcttggtcgtcctttggatgattct
gttgaccgtttgcttgatgagtaccctgagttcttcatttcgcatgaccgggaatttcat
gtggcctcacttaattacaaacccgacttcaaggtcatgccagaaggatgggatggtaca
atcaaagatatggatgaagtccattatgagatctcaaagaaagaggatgacatgctttac
gaagaatttgtccgaaggtttgagttcaacaaaatgaaatggagaggagaagtgatgtgc
cacaagtacagcaggagacgttcatcagagggatggaaaatcacggttgagaaattgggt
gctaagggcaaacgtggagccggaggtggctggaagtttatgagtcttccagatggatca
agccgaccactcaacgaaatggagaaggtctatgttaagcgtgaaaccccactacgtcgc
cgaagcattatatcaacggaggtgatgcgttactcgcccgcgaaccagaagcggaggtcg
aagcggaaacagaagcggaaggagaggcgcatagcatgtctcaaagccggtaagcaaacg
tga
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