Arabidopsis thaliana (thale cress): AT5G62800
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Entry
AT5G62800 CDS
T00041
Name
(RefSeq) Protein with RING/U-box and TRAF-like domain
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
AT5G62800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G62800
Enzymes [BR:
ath01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
AT5G62800
Ubiquitin system [BR:
ath04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
AT5G62800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
DUF4428
zf-C3HC4_2
DM
Trm112p
Motif
Other DBs
NCBI-GeneID:
836401
NCBI-ProteinID:
NP_001331378
TAIR:
AT5G62800
UniProt:
Q9FM14
LinkDB
All DBs
Position
5:25218634..25219967
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AA seq
314 aa
AA seq
DB search
MEDSNSHPQNQTSKRKSSHPQKKQRMENETRSAKLLDLDVLDCPVCFEPLTIPTFQCDDG
HIVCNFCFAKVSNKCPGPGCDLPIGNKRCFAMERVLESAFVPCQNTEFGCTKSVSYEKVS
SHEKECNYSQCSCPNLECNYTGSYNIIYGHFMRRHLYNSTIVSSKWGYSTVDVLINIKEK
VSVLWESRQKLLFVVQCFKERHGVYVTVRRIAPPASEFKKFSYRLSYSIDGHNVTYESPE
VKRLLEVNSQIPDDSFMFVPNCLLHGFLIKPANEVQQVTIAQETVMEDPPTSLFKNSVPI
REDQIQNAITNSIR
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggaggatagcaactctcacccgcaaaatcaaacatcaaaaagaaaaagctctcacccg
caaaagaagcaacgtatggagaatgaaacacgatcggctaagttgttggatcttgatgtt
cttgactgtccggtttgcttcgagccgctcactattcctacctttcagtgtgatgatgga
catatagtttgcaatttttgctttgccaaagtgagtaacaagtgccctggtcctgggtgt
gatttacccattggtaataagcgatgcttcgcaatggagagggttctcgaatcagccttt
gttccatgtcaaaatactgagtttggctgcacaaaaagtgtctcttatgaaaaagtgtca
agtcacgaaaaggaatgcaactactctcaatgctcttgccctaacctcgaatgcaattac
actggctcatataacatcatctacggtcactttatgcgtcgccatctttacaatagtacg
atcgtttcctccaaatggggatattccactgttgatgttctaataaacatcaaagaaaag
gtttcagttctctgggaatctcgtcagaaacttttgtttgtagttcagtgtttcaaggag
cgacatggtgtttatgttactgttagacgcatcgcaccacctgcttcagaattcaagaag
ttctcgtatcgtctttcgtatagtatcgacggacataatgttacttacgaatcaccagaa
gtaaagaggcttcttgaagtgaattctcaaatccctgatgacagtttcatgtttgtccct
aactgtttactgcatggatttttaataaagcctgctaatgaggttcagcaagttaccatt
gctcaggaaactgttatggaggatcctccaacgtctctgtttaagaattcagtaccaatt
cgagaggatcaaattcagaacgctatcacaaattccattcgctaa
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